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The map label for this gene is 15898565

Identifier: 15898565

GI number: 15898565

Start: 1599778

End: 1600218

Strand: Reverse

Name: 15898565

Synonym: SSO1766

Alternate gene names: NA

Gene position: 1600218-1599778 (Counterclockwise)

Preceding gene: 15898566

Following gene: 15898563

Centisome position: 53.48

GC content: 43.31

Gene sequence:

>441_bases
ATGGGGTTCAATGACGTTTTTCTCCTCATGGGTTATACTACTTCCAAGCTCAAGAGCTTCACAGCCTTTAGGAAGTATAA
GGGTTGGGGTAGGAAGCACGGTAAGTCCTACTTCGGGTTTAAGGTCTGTAATCTTGTGGAAAGGAGGACTAATTTCGTTA
GGGACTTCAAGGTTGGATTGGCTAATTTGAGTGATCTAGCCTTTTCATTTGATAACGTTAAGTTAATGGCTGATAGGGCT
TGGATTTCTAGGAAGGACGTCTTAGTTAAGGGTGTTGGTAGTGCTAGGCTTCCGGTTGAGGGTAGTGGTGTTGAGATTAG
GGAAGGTAAGGCTTCGTCTACAACCTTAAGGGGAGTGGTTATGGAGGTATTCTTCCTTAACTTCTATCGTGATCTCGAAA
TTCTTTCGACGAGGATTAGGACGAAGGTACTCGTTAATTAA

Upstream 100 bases:

>100_bases
CGAGGACTACCACATAATTGACACATTCTTCCGTGAAGCCTACCCAGGAAAGAGGAGTCTTCAAAACGGTCTTGAGAAGA
TCTCACTTGACCTTAAGGAG

Downstream 100 bases:

>100_bases
CGAGGTTCGTTTACGTGTTTACTTATTGTTATGGCAAATTTTATTGCAAGATTGTACAATTATCTGTATTTTCCCTCATT
AATATATATTATATTATTTT

Product: second ORF in transposon ISC1212

Products: NA

Alternate protein names: ORF2 In Transposon ISC; Partial Transposase In ISC

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MGFNDVFLLMGYTTSKLKSFTAFRKYKGWGRKHGKSYFGFKVCNLVERRTNFVRDFKVGLANLSDLAFSFDNVKLMADRA
WISRKDVLVKGVGSARLPVEGSGVEIREGKASSTTLRGVVMEVFFLNFYRDLEILSTRIRTKVLVN

Sequences:

>Translated_146_residues
MGFNDVFLLMGYTTSKLKSFTAFRKYKGWGRKHGKSYFGFKVCNLVERRTNFVRDFKVGLANLSDLAFSFDNVKLMADRA
WISRKDVLVKGVGSARLPVEGSGVEIREGKASSTTLRGVVMEVFFLNFYRDLEILSTRIRTKVLVN
>Mature_145_residues
GFNDVFLLMGYTTSKLKSFTAFRKYKGWGRKHGKSYFGFKVCNLVERRTNFVRDFKVGLANLSDLAFSFDNVKLMADRAW
ISRKDVLVKGVGSARLPVEGSGVEIREGKASSTTLRGVVMEVFFLNFYRDLEILSTRIRTKVLVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16637; Mature: 16505

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFNDVFLLMGYTTSKLKSFTAFRKYKGWGRKHGKSYFGFKVCNLVERRTNFVRDFKVGL
CCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ANLSDLAFSFDNVKLMADRAWISRKDVLVKGVGSARLPVEGSGVEIREGKASSTTLRGVV
CCHHHHHCCCCCEEEEEHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHH
MEVFFLNFYRDLEILSTRIRTKVLVN
HHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
GFNDVFLLMGYTTSKLKSFTAFRKYKGWGRKHGKSYFGFKVCNLVERRTNFVRDFKVGL
CCCEEEEEECCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ANLSDLAFSFDNVKLMADRAWISRKDVLVKGVGSARLPVEGSGVEIREGKASSTTLRGVV
CCHHHHHCCCCCEEEEEHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHH
MEVFFLNFYRDLEILSTRIRTKVLVN
HHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA