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The map label for this gene is 15898525

Identifier: 15898525

GI number: 15898525

Start: 1560502

End: 1561029

Strand: Reverse

Name: 15898525

Synonym: SSO1717

Alternate gene names: NA

Gene position: 1561029-1560502 (Counterclockwise)

Preceding gene: 15898526

Following gene: 15898523

Centisome position: 52.17

GC content: 39.02

Gene sequence:

>528_bases
TTGGAAAGAAAGGCACTGTTCTTTCTAGACGAGTGTAGGACAGTAATTAGCACGTCAATTAAGAAGGTTCTAGCTAAGGT
TGGCAGTAAGCCCGTAATGCGCGTCAATATAGGTTTTTCCTCAATCTATGTTATTCTAGCTATAAACGCTTGGACCGGCG
AAGTAGTGGTTTCTCTTGCTAAAAGGCCTAACTCTGAATCCGTTAAGTATTTCTTGAGGTACTTTAAGAGGCGTGTGGGT
AGTGGTAGGGTTTACATGGTCATGGATAATTACTCTCCTCACAAGACTAAGGGTACGCTTGAGGTTTGTCGCAGGAAGGG
TATTCATCCCGTGTTTACTCCTCCTTACTCGCCTGAGCTTAATATGGCTGAGGCGGTCTTCAAGTCCCTCAAGAACTACA
TGAGCAATAAAATATTCTATACGATAGAAGACGTTAAAAACTGTATTAAACAATTCTTTAAAGAAAATAAGTATAGATTT
AATCTTAATGCAATAACATACCTAGGATTAGATAAAATTGAAGTCTAA

Upstream 100 bases:

>100_bases
AACTAGTCCACGAACTAGGATACAACCTAGTAAAACCCAGACCTACCAACATCCAAGCAGAAAAGGACAAGTGGGAAGAT
TTTAAAAAAAAATAAAGAAA

Downstream 100 bases:

>100_bases
GAACTTTCCGGAAATACTAGTGTAGGTAGAAGAAGTACGGTCCGGTTGACTCCATTATCCCTTCCTTATATTCGCCAAGG
AATTTGATTAGTTCTTCTAT

Product: second ORF in transposon ISC1048

Products: NA

Alternate protein names: ORF2 In Transposon ISC; Transposase ISC

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MERKALFFLDECRTVISTSIKKVLAKVGSKPVMRVNIGFSSIYVILAINAWTGEVVVSLAKRPNSESVKYFLRYFKRRVG
SGRVYMVMDNYSPHKTKGTLEVCRRKGIHPVFTPPYSPELNMAEAVFKSLKNYMSNKIFYTIEDVKNCIKQFFKENKYRF
NLNAITYLGLDKIEV

Sequences:

>Translated_175_residues
MERKALFFLDECRTVISTSIKKVLAKVGSKPVMRVNIGFSSIYVILAINAWTGEVVVSLAKRPNSESVKYFLRYFKRRVG
SGRVYMVMDNYSPHKTKGTLEVCRRKGIHPVFTPPYSPELNMAEAVFKSLKNYMSNKIFYTIEDVKNCIKQFFKENKYRF
NLNAITYLGLDKIEV
>Mature_175_residues
MERKALFFLDECRTVISTSIKKVLAKVGSKPVMRVNIGFSSIYVILAINAWTGEVVVSLAKRPNSESVKYFLRYFKRRVG
SGRVYMVMDNYSPHKTKGTLEVCRRKGIHPVFTPPYSPELNMAEAVFKSLKNYMSNKIFYTIEDVKNCIKQFFKENKYRF
NLNAITYLGLDKIEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20260; Mature: 20260

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKALFFLDECRTVISTSIKKVLAKVGSKPVMRVNIGFSSIYVILAINAWTGEVVVSLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHEEEEEEEEECCHHHHHHHHH
KRPNSESVKYFLRYFKRRVGSGRVYMVMDNYSPHKTKGTLEVCRRKGIHPVFTPPYSPEL
HCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
NMAEAVFKSLKNYMSNKIFYTIEDVKNCIKQFFKENKYRFNLNAITYLGLDKIEV
CHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCEEEEECEEEEECCCCCCC
>Mature Secondary Structure
MERKALFFLDECRTVISTSIKKVLAKVGSKPVMRVNIGFSSIYVILAINAWTGEVVVSLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHEEEEEEEEECCHHHHHHHHH
KRPNSESVKYFLRYFKRRVGSGRVYMVMDNYSPHKTKGTLEVCRRKGIHPVFTPPYSPEL
HCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
NMAEAVFKSLKNYMSNKIFYTIEDVKNCIKQFFKENKYRFNLNAITYLGLDKIEV
CHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCEEEEECEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA