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The map label for this gene is 15898193

Identifier: 15898193

GI number: 15898193

Start: 1189545

End: 1189979

Strand: Direct

Name: 15898193

Synonym: SSO1352

Alternate gene names: NA

Gene position: 1189545-1189979 (Clockwise)

Preceding gene: 15898192

Following gene: 15898196

Centisome position: 39.75

GC content: 35.17

Gene sequence:

>435_bases
ATGCAAAAAATAGATGAAAAACTCCAATTAATGAATACTATAGCTAAAATCTATAGAGGATCAATAAAGGAGTTTAACAA
CAGGCTAGGTAAGTTAATGAACCTATCCTACTTGGACTTTTCAATACTTAAGGCCACATCTGAGGAACCTAGATCAATGG
TTTATCTTGCTAACAGATATTTCGTAACTCAATCAGCAATAACTGCAGCAGTGGATAAATTGGAAGCCAAGGGATTGGTT
AGGAGGATAAGGGACAGTAAAGATAGACGAATCGTAATTGTGGAAATAACACCAAAGGGCAGGCAAGTGTTATTAGAAGC
TAATGAAGTACTTAGAAATTTAGTAAATGAAATGCTAAGTGATGTGGAAAACGTAGAAGAACTCCTAGAGGGTTTAAATA
AAATACTATCTAGAATAGGAAGCTCCAAGGACTAG

Upstream 100 bases:

>100_bases
GCATTCTACATAAGTTCAGTTTTAACTTTCATTGCAGCTATTGCCTCGGCTTTAAGAGGTAGGAGAGTTATTGCAGAACA
ACAAGATGGTGGTGAAATAA

Downstream 100 bases:

>100_bases
GGCTACCAATGTAATGATCCAAATAGTTCATTTCCGCCTTTCCATTATAGCCATTTATCCTTGATGGCTGGTCCCATACC
ATACCGTTTTTAACCAAATT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MQKIDEKLQLMNTIAKIYRGSIKEFNNRLGKLMNLSYLDFSILKATSEEPRSMVYLANRYFVTQSAITAAVDKLEAKGLV
RRIRDSKDRRIVIVEITPKGRQVLLEANEVLRNLVNEMLSDVENVEELLEGLNKILSRIGSSKD

Sequences:

>Translated_144_residues
MQKIDEKLQLMNTIAKIYRGSIKEFNNRLGKLMNLSYLDFSILKATSEEPRSMVYLANRYFVTQSAITAAVDKLEAKGLV
RRIRDSKDRRIVIVEITPKGRQVLLEANEVLRNLVNEMLSDVENVEELLEGLNKILSRIGSSKD
>Mature_144_residues
MQKIDEKLQLMNTIAKIYRGSIKEFNNRLGKLMNLSYLDFSILKATSEEPRSMVYLANRYFVTQSAITAAVDKLEAKGLV
RRIRDSKDRRIVIVEITPKGRQVLLEANEVLRNLVNEMLSDVENVEELLEGLNKILSRIGSSKD

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16485; Mature: 16485

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIDEKLQLMNTIAKIYRGSIKEFNNRLGKLMNLSYLDFSILKATSEEPRSMVYLANRY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHH
FVTQSAITAAVDKLEAKGLVRRIRDSKDRRIVIVEITPKGRQVLLEANEVLRNLVNEMLS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
DVENVEELLEGLNKILSRIGSSKD
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQKIDEKLQLMNTIAKIYRGSIKEFNNRLGKLMNLSYLDFSILKATSEEPRSMVYLANRY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHH
FVTQSAITAAVDKLEAKGLVRRIRDSKDRRIVIVEITPKGRQVLLEANEVLRNLVNEMLS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
DVENVEELLEGLNKILSRIGSSKD
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA