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The map label for this gene is 15898178

Identifier: 15898178

GI number: 15898178

Start: 1173070

End: 1173648

Strand: Direct

Name: 15898178

Synonym: SSO1335

Alternate gene names: NA

Gene position: 1173070-1173648 (Clockwise)

Preceding gene: 15898174

Following gene: 15898179

Centisome position: 39.2

GC content: 38.17

Gene sequence:

>579_bases
ATGCTAAGATCAAAGGAAGCATGCCAAAGACTAGGAATATCCTATGCAACACTTAGAGAATACGTTAAGAAAGGATACAT
AAAACCAGTTATACTACAGAGCGGAAAATGGAGATTCAGAGAAGAAGACGTAGAGAGGCTAATGGGAATTATTAGAAAAA
GAAAAGTAATACTTTACGCCAGAGTATCATCTTCCACACAAAAAGACGATCTGGCAAACCAAGTGAAATATCTAGAGGAA
CAAGTCAAAGAATACGACCAAGTAATCACAGACATAGGTTCCGGGTTAAACATGAAGAGAAAGGGGTTCTTGAAGTTGTT
GAGAATGATATTAAATAACGAAGTATCACGCGTAGTTATTGCTTACCCAGACAGACTTGTTAGATTCGGCTTCGAAATCC
TGGAGGAAGTGTGCAAAGCACATGGCTGTGAAATAGTAGTAATAAACCAAGAGGACAAAGAAGAAGAATTGGTCGAAGAC
TTAGTCTCAATACTACTCTCATTCAGTGGGAAACTACATGGCATGAGAAGTCATAAATACGAGAAGGTGAAGAAATGTGC
TGAAGAACTTAAGGCTTAA

Upstream 100 bases:

>100_bases
AAGGATTGGGTAACAGCGTTAAAGGTGGCCATATCAGCCGTTGCCAACAGTTTCAGATAAACCGTAAAGTTTATATTATT
TTGCCACAAACTCTTATACA

Downstream 100 bases:

>100_bases
GTCATTCCAACCAGAGGAAGAGTACGTGCACTTCACGTACTCCATCAAGAACGACAAGAGGGAGGAGAGCAAAGAATTAA
TTAAAGAATACACAACACTA

Product: transposon ISC1778 Orf1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLRSKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVERLMGIIRKRKVILYARVSSSTQKDDLANQVKYLEE
QVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVIAYPDRLVRFGFEILEEVCKAHGCEIVVINQEDKEEELVED
LVSILLSFSGKLHGMRSHKYEKVKKCAEELKA

Sequences:

>Translated_192_residues
MLRSKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVERLMGIIRKRKVILYARVSSSTQKDDLANQVKYLEE
QVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVIAYPDRLVRFGFEILEEVCKAHGCEIVVINQEDKEEELVED
LVSILLSFSGKLHGMRSHKYEKVKKCAEELKA
>Mature_192_residues
MLRSKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVERLMGIIRKRKVILYARVSSSTQKDDLANQVKYLEE
QVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVIAYPDRLVRFGFEILEEVCKAHGCEIVVINQEDKEEELVED
LVSILLSFSGKLHGMRSHKYEKVKKCAEELKA

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 22344; Mature: 22344

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVERLMGIIRKRKVILYA
CCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEE
RVSSSTQKDDLANQVKYLEEQVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHEEEE
AYPDRLVRFGFEILEEVCKAHGCEIVVINQEDKEEELVEDLVSILLSFSGKLHGMRSHKY
CCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHCCHHHHHH
EKVKKCAEELKA
HHHHHHHHHHCC
>Mature Secondary Structure
MLRSKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVERLMGIIRKRKVILYA
CCCCHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEE
RVSSSTQKDDLANQVKYLEEQVKEYDQVITDIGSGLNMKRKGFLKLLRMILNNEVSRVVI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHEEEE
AYPDRLVRFGFEILEEVCKAHGCEIVVINQEDKEEELVEDLVSILLSFSGKLHGMRSHKY
CCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCHHCCHHHHHH
EKVKKCAEELKA
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]