Click here to switch to the map view.

The map label for this gene is 15898150

Identifier: 15898150

GI number: 15898150

Start: 1139614

End: 1140414

Strand: Direct

Name: 15898150

Synonym: SSO1309

Alternate gene names: NA

Gene position: 1139614-1140414 (Clockwise)

Preceding gene: 15898149

Following gene: 15898151

Centisome position: 38.09

GC content: 35.46

Gene sequence:

>801_bases
ATGGATTATAAAGTAGAGTATATTAGCATTTACGAATACGAGGCTGATGTGATATCAAACGAGAATACGCTGAAGATTGT
ACCATATAACGGGGATAATCAAGTGCTAATATCACACGAGGTTGGAACTATACCTAATGGTTACAAAACGTCTTATGTAG
ATATATTTGGAAACATTGTGTATAAGATAAAGGTTCAAGAATTACATAGAAGGTTGGAAATTTATTCCAAAAGTGTAGTG
ACACTGGATAAAAAAGTAATAAAGACAGATTATGAGTTCCCGTACAATTACGGCTTCAATGAGTTCCTTTTACCAACAAG
ATTAGTTGATCCAGAACAATTCCAGAAAATAGCTAAGGAGCTAACAAAGAGTTTAAAGACACTTGGAGAAGTAATAGAAA
CAATAGTTAATTTCGTGAGAAAGAAGATTATATATAAGCCCGGAATAACCAACATCAATACTACGGCATTTGAAGCGTAT
AGTTTGGGTTATGGAGTTTGTCAAGATTATACTCACATCACGTTAGGATTACTTAGAGCTCTAGGTATTCCAGCTAGATA
TGTAATGGGAGTAGTTAATGATAATCCAAGAGCAACTCACGCTTGGGTTGAAGTGTTAACTCCAGATGGTACGTACATAG
ATGTTGATCCTACTAGAGGTAGGTTTTACAATTTAGATTATATAAAGTTCGCAGTTGGTAGGGACTTCAATGATGTAAGT
CCAGTGATAGGGTTTTTCGTTAGTTCTGGAAGGGGATGGCTTAAGGAAGTAAGAATAAAGGTGGAGAAAAGTGCTTCCTA
A

Upstream 100 bases:

>100_bases
TCACTTACTACGATAAGGTTGCCAGTGCAGTTTTAAGTAGAGTGGGAATAATGGGAAGTAGGATAACAAATAACTCGTCT
GGAGGGATGGTGAAGCCTCT

Downstream 100 bases:

>100_bases
AAGTATTGCGTATAAGATTTACTGGGCTGGAAGGTATTTGGAAAGAATAGAGAACATATGTAGGATGTCGTTACTAGCCA
TTAATAACGGGTTAAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MDYKVEYISIYEYEADVISNENTLKIVPYNGDNQVLISHEVGTIPNGYKTSYVDIFGNIVYKIKVQELHRRLEIYSKSVV
TLDKKVIKTDYEFPYNYGFNEFLLPTRLVDPEQFQKIAKELTKSLKTLGEVIETIVNFVRKKIIYKPGITNINTTAFEAY
SLGYGVCQDYTHITLGLLRALGIPARYVMGVVNDNPRATHAWVEVLTPDGTYIDVDPTRGRFYNLDYIKFAVGRDFNDVS
PVIGFFVSSGRGWLKEVRIKVEKSAS

Sequences:

>Translated_266_residues
MDYKVEYISIYEYEADVISNENTLKIVPYNGDNQVLISHEVGTIPNGYKTSYVDIFGNIVYKIKVQELHRRLEIYSKSVV
TLDKKVIKTDYEFPYNYGFNEFLLPTRLVDPEQFQKIAKELTKSLKTLGEVIETIVNFVRKKIIYKPGITNINTTAFEAY
SLGYGVCQDYTHITLGLLRALGIPARYVMGVVNDNPRATHAWVEVLTPDGTYIDVDPTRGRFYNLDYIKFAVGRDFNDVS
PVIGFFVSSGRGWLKEVRIKVEKSAS
>Mature_266_residues
MDYKVEYISIYEYEADVISNENTLKIVPYNGDNQVLISHEVGTIPNGYKTSYVDIFGNIVYKIKVQELHRRLEIYSKSVV
TLDKKVIKTDYEFPYNYGFNEFLLPTRLVDPEQFQKIAKELTKSLKTLGEVIETIVNFVRKKIIYKPGITNINTTAFEAY
SLGYGVCQDYTHITLGLLRALGIPARYVMGVVNDNPRATHAWVEVLTPDGTYIDVDPTRGRFYNLDYIKFAVGRDFNDVS
PVIGFFVSSGRGWLKEVRIKVEKSAS

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2569c [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013589
- InterPro:   IPR002931 [H]

Pfam domain/function: PF08379 Bact_transglu_N; PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 30445; Mature: 30445

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYKVEYISIYEYEADVISNENTLKIVPYNGDNQVLISHEVGTIPNGYKTSYVDIFGNIV
CCEEEEEEEEEEEEHHEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHEEECCEE
YKIKVQELHRRLEIYSKSVVTLDKKVIKTDYEFPYNYGFNEFLLPTRLVDPEQFQKIAKE
EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHH
LTKSLKTLGEVIETIVNFVRKKIIYKPGITNINTTAFEAYSLGYGVCQDYTHITLGLLRA
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHEEHHHCCCHHHHHHHHHHHHHHHH
LGIPARYVMGVVNDNPRATHAWVEVLTPDGTYIDVDPTRGRFYNLDYIKFAVGRDFNDVS
HCCCHHHEEEEECCCCCCEEEEEEEECCCCCEEECCCCCCCEEECCEEEEEECCCCCHHH
PVIGFFVSSGRGWLKEVRIKVEKSAS
HHHHHHHCCCCHHHHHHEEEEECCCC
>Mature Secondary Structure
MDYKVEYISIYEYEADVISNENTLKIVPYNGDNQVLISHEVGTIPNGYKTSYVDIFGNIV
CCEEEEEEEEEEEEHHEECCCCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHEEECCEE
YKIKVQELHRRLEIYSKSVVTLDKKVIKTDYEFPYNYGFNEFLLPTRLVDPEQFQKIAKE
EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHH
LTKSLKTLGEVIETIVNFVRKKIIYKPGITNINTTAFEAYSLGYGVCQDYTHITLGLLRA
HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHEEHHHCCCHHHHHHHHHHHHHHHH
LGIPARYVMGVVNDNPRATHAWVEVLTPDGTYIDVDPTRGRFYNLDYIKFAVGRDFNDVS
HCCCHHHEEEEECCCCCCEEEEEEEECCCCCEEECCCCCCCEEECCEEEEEECCCCCHHH
PVIGFFVSSGRGWLKEVRIKVEKSAS
HHHHHHHCCCCHHHHHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]