Click here to switch to the map view.

The map label for this gene is 15898053

Identifier: 15898053

GI number: 15898053

Start: 1041182

End: 1042165

Strand: Reverse

Name: 15898053

Synonym: SSO1200

Alternate gene names: NA

Gene position: 1042165-1041182 (Counterclockwise)

Preceding gene: 15898054

Following gene: 15898048

Centisome position: 34.83

GC content: 38.72

Gene sequence:

>984_bases
ATGCAAGATTTGGTTCAAGCTTATAAGGAAGAGAAGAACGCGAGAATTAAGGAGAGGATTCTTGCAGTGAAGCTGCACGT
AGTTGATGGTAAATCGGAGAAAGAAGTTTCGAAAATGCTTAACAAGGGCTATTCCACGATAAAATTGTGGATTGGCAAGT
ACAAGAAAGAAGGTCTTGATGGACTAAAGGACAAGCCCAGATCAGGAAGACCCAGAAAAGTAGAAGAGGAAAAGATAAAA
CAAATTCTGGAAGATAAGCCCCAAAAATACGGAATACAACAAGAATATTGGACAATGAAAACACTCAAGATAGCACTACA
AGAACAAGGAATAGAATACAAGAAATCCAGACTATACGAACTAGTCCACGAACTAGGATACAACCTAGTAAAACCCAGAC
CTACCAACATCCAAGCAGAAAAGGACAAGTGGGAAGATTTTAAAAAAATAAAGAAATTGGAAAGAAAGGCACTGTTCTTT
CTAGACGAGTGTAGGACAGTAATTAGCACGTCAATTAAGAAGGTTCTAGCTAAGGTTGGCAGTAAGCCCGTAATGCGCGT
CAATATAGGTTTTTCCTCAATCTATGTTATTCTAGCTATAAACGCTTGGACCGGCGAAGTAGTGGTTTCTCTTGCTAAAA
GGCCTAACTCTGAATCCGTTAAGTATTTCTTGAGGTACTTTAAGAGGCGTGTGGGTAGTGGTAGGGTTTACATGGTCATG
GATAATTACTCTCCTCACAAGACTAAGGGTACGCTTGAGGTTTGTCGCAGGAAGGGTATTCATCCCGTGTTTACTCCTCC
TTACTCGCCTGAGCTTAATATGGCTGAGGCGGTCTTCAAGTCCCTCAAGAACTACATGAGCAATAAAATATTCTATACGA
TAGAAGACGTTAAAAACTGTATTAAACAGTTCTTTGAAGAAAATAAGTATAGATTTAATCTTAATGCAATAACATACCTA
GGATTAGATAAAATTGAAGTCTAA

Upstream 100 bases:

>100_bases
CACCAACTCTTGCTAAAATTATACAACCCAGCGTTCTGCCAATACCCGGAATCGTTAGTGTTTCCGAAAAGTTTATAGAT
TAGTATTACCAGATTGAACT

Downstream 100 bases:

>100_bases
GAACTTTCCGGAAATACTAGTGAAGATCAAACTATCCTTAGGAACAAGATCCTCAAGCTCTTCCTCAATCTCCCTCTTCC
TAACCTTAAGCCTCTCCAAC

Product: transposase ISC1048

Products: NA

Alternate protein names: ORF1 In Transposon ISC; ISSod10 Transposase OrfA; Transposase And Inactivated Derivative; Integrase Catalytic Region; Transposase; Second ORF In Transposon ISC; ORF2 In Transposon ISC; Transposase ISC

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLDGLKDKPRSGRPRKVEEEKIK
QILEDKPQKYGIQQEYWTMKTLKIALQEQGIEYKKSRLYELVHELGYNLVKPRPTNIQAEKDKWEDFKKIKKLERKALFF
LDECRTVISTSIKKVLAKVGSKPVMRVNIGFSSIYVILAINAWTGEVVVSLAKRPNSESVKYFLRYFKRRVGSGRVYMVM
DNYSPHKTKGTLEVCRRKGIHPVFTPPYSPELNMAEAVFKSLKNYMSNKIFYTIEDVKNCIKQFFEENKYRFNLNAITYL
GLDKIEV

Sequences:

>Translated_327_residues
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLDGLKDKPRSGRPRKVEEEKIK
QILEDKPQKYGIQQEYWTMKTLKIALQEQGIEYKKSRLYELVHELGYNLVKPRPTNIQAEKDKWEDFKKIKKLERKALFF
LDECRTVISTSIKKVLAKVGSKPVMRVNIGFSSIYVILAINAWTGEVVVSLAKRPNSESVKYFLRYFKRRVGSGRVYMVM
DNYSPHKTKGTLEVCRRKGIHPVFTPPYSPELNMAEAVFKSLKNYMSNKIFYTIEDVKNCIKQFFEENKYRFNLNAITYL
GLDKIEV
>Mature_327_residues
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLDGLKDKPRSGRPRKVEEEKIK
QILEDKPQKYGIQQEYWTMKTLKIALQEQGIEYKKSRLYELVHELGYNLVKPRPTNIQAEKDKWEDFKKIKKLERKALFF
LDECRTVISTSIKKVLAKVGSKPVMRVNIGFSSIYVILAINAWTGEVVVSLAKRPNSESVKYFLRYFKRRVGSGRVYMVM
DNYSPHKTKGTLEVCRRKGIHPVFTPPYSPELNMAEAVFKSLKNYMSNKIFYTIEDVKNCIKQFFEENKYRFNLNAITYL
GLDKIEV

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38287; Mature: 38287

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLD
CHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCC
GLKDKPRSGRPRKVEEEKIKQILEDKPQKYGIQQEYWTMKTLKIALQEQGIEYKKSRLYE
CCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
LVHELGYNLVKPRPTNIQAEKDKWEDFKKIKKLERKALFFLDECRTVISTSIKKVLAKVG
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SKPVMRVNIGFSSIYVILAINAWTGEVVVSLAKRPNSESVKYFLRYFKRRVGSGRVYMVM
CCCEEEEECCHHEEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEE
DNYSPHKTKGTLEVCRRKGIHPVFTPPYSPELNMAEAVFKSLKNYMSNKIFYTIEDVKNC
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHH
IKQFFEENKYRFNLNAITYLGLDKIEV
HHHHHHCCCEEEEECEEEEECCHHCCC
>Mature Secondary Structure
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLD
CHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCC
GLKDKPRSGRPRKVEEEKIKQILEDKPQKYGIQQEYWTMKTLKIALQEQGIEYKKSRLYE
CCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH
LVHELGYNLVKPRPTNIQAEKDKWEDFKKIKKLERKALFFLDECRTVISTSIKKVLAKVG
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SKPVMRVNIGFSSIYVILAINAWTGEVVVSLAKRPNSESVKYFLRYFKRRVGSGRVYMVM
CCCEEEEECCHHEEEEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEE
DNYSPHKTKGTLEVCRRKGIHPVFTPPYSPELNMAEAVFKSLKNYMSNKIFYTIEDVKNC
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHH
IKQFFEENKYRFNLNAITYLGLDKIEV
HHHHHHCCCEEEEECEEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA