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The map label for this gene is ganQ [H]

Identifier: 15898022

GI number: 15898022

Start: 1008055

End: 1008945

Strand: Reverse

Name: ganQ [H]

Synonym: SSO1169

Alternate gene names: 15898022

Gene position: 1008945-1008055 (Counterclockwise)

Preceding gene: 15898023

Following gene: 15898021

Centisome position: 33.72

GC content: 36.81

Gene sequence:

>891_bases
GTGATTCACATGATGCAAATAAAAAAATATAGGTTATTTAAAATCCTAAGATTAGCCATCTCATATTTAGTGTTAATAAT
TATGGCTGCTTTTTCTATATTCCCGCTCTATTATGTCTTCATGACATCTTTCAGCAACGCTCCAAATTTGATTTCACTAG
CTGTGTCGGATTTATTGCCTAAACACATTTACTTCACAGCCTACAAATATTTATTTACTACAAACTTATATGGAGGCTCT
TTCCCGTTATGGATAAGAAATAGTTTAATATTAGCTGGTTCTACCGCTATCATATCAGTTCTATTAGCCTTAATAACTGG
ATATGCCCTATCTAGGCTCAACGTGCCTGCTAAGAAAATTTTAGCAACTTTCATCTATATTGTTACGTTTTTCCCATACA
CCGCTTCTGCAGTACCCTTATATCTATTGTTTGCTAAGTTCCATTTGCTTAACTACATAGGTCTTATTTTAGCCTATACT
CCTGGAACATCAATTTTTGCAGCTTTCATAGCAAAGTTAAGCATAGATTCGATTCCTCCATCATATGAGGAGATAGCAAT
GATCGATGGTCTATCTAGATTTGGGGCATTTTTAAGAATAGTGATGAGATTGGCATTACCAGTGGTGGCTTTAACAGCTC
TATTAGGCTTTAGTGGAACATACTTGGATTTCGCATTAGCGTATTCTTTTCTCCTTCCCAACGTAAAGGAGTGGACTGCA
ACGATAGGGCTGTATTATATGGCTGGTTTACTAAATCAAGCAAGTGCTCCAGCATACAATATATTTGCAGCTGGAGCAGT
TATAATGGGGATACCGTTAATGGCATTGTTCATTGTTTCGCAAAGAATGATGACCCGTGCATATAGTAATCTGGCAGGGG
TGAAGCAATGA

Upstream 100 bases:

>100_bases
GCTCTAGCAGCTGCTTGGTCCATAATATCAACCATTTTCGTAATAGTTTTAGGAATAATAGTTATCAAATACACGAGAAT
TTTAGATTCGTTTACATGAG

Downstream 100 bases:

>100_bases
TGAGTTACGTTAAATTAGAGAATATTTGGAAGGAGTATGAGGAGAAGAAAAGGAAAGTGCAAGTTCTTAGGGGACTGAAT
TTAGAGATAGAAAAGGGAGA

Product: sugar ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MIHMMQIKKYRLFKILRLAISYLVLIIMAAFSIFPLYYVFMTSFSNAPNLISLAVSDLLPKHIYFTAYKYLFTTNLYGGS
FPLWIRNSLILAGSTAIISVLLALITGYALSRLNVPAKKILATFIYIVTFFPYTASAVPLYLLFAKFHLLNYIGLILAYT
PGTSIFAAFIAKLSIDSIPPSYEEIAMIDGLSRFGAFLRIVMRLALPVVALTALLGFSGTYLDFALAYSFLLPNVKEWTA
TIGLYYMAGLLNQASAPAYNIFAAGAVIMGIPLMALFIVSQRMMTRAYSNLAGVKQ

Sequences:

>Translated_296_residues
MIHMMQIKKYRLFKILRLAISYLVLIIMAAFSIFPLYYVFMTSFSNAPNLISLAVSDLLPKHIYFTAYKYLFTTNLYGGS
FPLWIRNSLILAGSTAIISVLLALITGYALSRLNVPAKKILATFIYIVTFFPYTASAVPLYLLFAKFHLLNYIGLILAYT
PGTSIFAAFIAKLSIDSIPPSYEEIAMIDGLSRFGAFLRIVMRLALPVVALTALLGFSGTYLDFALAYSFLLPNVKEWTA
TIGLYYMAGLLNQASAPAYNIFAAGAVIMGIPLMALFIVSQRMMTRAYSNLAGVKQ
>Mature_296_residues
MIHMMQIKKYRLFKILRLAISYLVLIIMAAFSIFPLYYVFMTSFSNAPNLISLAVSDLLPKHIYFTAYKYLFTTNLYGGS
FPLWIRNSLILAGSTAIISVLLALITGYALSRLNVPAKKILATFIYIVTFFPYTASAVPLYLLFAKFHLLNYIGLILAYT
PGTSIFAAFIAKLSIDSIPPSYEEIAMIDGLSRFGAFLRIVMRLALPVVALTALLGFSGTYLDFALAYSFLLPNVKEWTA
TIGLYYMAGLLNQASAPAYNIFAAGAVIMGIPLMALFIVSQRMMTRAYSNLAGVKQ

Specific function: Could be part of a binding-protein-dependent transport system for arabinogalactan oligomers; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG3833

COG function: function code G; ABC-type maltose transport systems, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790464, Length=309, Percent_Identity=30.42071197411, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787571, Length=267, Percent_Identity=27.3408239700375, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32838; Mature: 32838

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHMMQIKKYRLFKILRLAISYLVLIIMAAFSIFPLYYVFMTSFSNAPNLISLAVSDLLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KHIYFTAYKYLFTTNLYGGSFPLWIRNSLILAGSTAIISVLLALITGYALSRLNVPAKKI
HHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEECHHHHHHHHHHHHHHHHHHHCCCCHHHH
LATFIYIVTFFPYTASAVPLYLLFAKFHLLNYIGLILAYTPGTSIFAAFIAKLSIDSIPP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
SYEEIAMIDGLSRFGAFLRIVMRLALPVVALTALLGFSGTYLDFALAYSFLLPNVKEWTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHH
TIGLYYMAGLLNQASAPAYNIFAAGAVIMGIPLMALFIVSQRMMTRAYSNLAGVKQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIHMMQIKKYRLFKILRLAISYLVLIIMAAFSIFPLYYVFMTSFSNAPNLISLAVSDLLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KHIYFTAYKYLFTTNLYGGSFPLWIRNSLILAGSTAIISVLLALITGYALSRLNVPAKKI
HHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEECHHHHHHHHHHHHHHHHHHHCCCCHHHH
LATFIYIVTFFPYTASAVPLYLLFAKFHLLNYIGLILAYTPGTSIFAAFIAKLSIDSIPP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC
SYEEIAMIDGLSRFGAFLRIVMRLALPVVALTALLGFSGTYLDFALAYSFLLPNVKEWTA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHH
TIGLYYMAGLLNQASAPAYNIFAAGAVIMGIPLMALFIVSQRMMTRAYSNLAGVKQ
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]