Click here to switch to the map view.

The map label for this gene is ykgA [H]

Identifier: 15898004

GI number: 15898004

Start: 988438

End: 989463

Strand: Reverse

Name: ykgA [H]

Synonym: SSO1148

Alternate gene names: 15898004

Gene position: 989463-988438 (Counterclockwise)

Preceding gene: 15898005

Following gene: 15898000

Centisome position: 33.07

GC content: 36.74

Gene sequence:

>1026_bases
ATGATTGCTGAGTGGGGAAAGCTTAGAGCTGTAGGAATGCATAAGCCTGGCTTAGAGGTAATGCTGGGTCTTTTAGATCC
CTCATCTTTCCTTTATGAAAGGCAATTCAATTGGAGTAAAGCTAGGAGAGAACATGATAATCTTAGAAGAGTGTTAAAAG
AGGAAGGAGTTAAAATATATAGGCTAAGACAAACAATTGTGAACAAGATTAGAAGAGACGATAGATTTAGGGAGAAGGTG
ATAGAAAAAGTTGGAGTTAATAATGATGATCCCGAATTCCTTGTCGAGTTGTTGATCTTAAGACCTATTCTTGGTTACGA
GAAGAGGGATAAAGGTACACACTTAGAGGTTAAACTGACTGACCCTCTTTCCAATCTCTATTTCATGAGGGATCAACAGA
TTACTACGGAAAAAGGAATAATAATGGGAAGGATGGCTACACATCAGAGAGAAAAAGAAGTTGAAGTTATGAAGTTGTTT
TGGGAAGCGTTAAATATAAAATATAAGGAAATAGGTAGAGGTAAATTTGAAGGTGGAGATTTCTTTCCAATGGGTGATTT
CAATCTGGTAGGTGTTGGAGTTAGAACTGATTTAGAGGGTGTAAGTGAGTTATTTAATATTTTGAATGGAGGAGAGATAG
GTATAATTCATTGGAATAGGGAAGAGTTCATTCATTTGGATACTTTCTTCAATGTTGGATCTTCTAGTTCAGTAGTTAGT
GTTAGGAGTTTCATGGAAGAGAGTAGGGTTGCTGTCTATTACGATAGGAAGATCATAAGGGAGACTACGTTATACGATTA
CGTGGTTAAAGAAAAGGGATTTAATTTAATTGAAGTGAGTGTGGATGAGGCAAAAAAGTATGTAACTAATTTTTTGACCA
TAGACGACGGTAAGATTGTCTCTCCTAAAATTTCCGCAAATAGGAAGCTTGAAAAAGAGTATGATGTAATAGAGGTTGAA
GTTTCAAATTTGACTGGTGGTGCCGGTGGGATTCATTGTATGACAGCTGTGATAAGGAGGGATTGA

Upstream 100 bases:

>100_bases
CACTTCATGGAAGGTACTGAGCACGCACTGGAAATGATATTAAATGCTACCCTTAGTTTATCTCCTTAATTTTATTTAGA
TTCACGCCGATTTTATTCTA

Downstream 100 bases:

>100_bases
TTAGATTTTCTTCCCCTTAGTTTCTGCAATCAGCAATACACTTATAAACGTCACCAGAACGTATGATAATGTGACTAGCA
CTAGTGAAGATTGATTAGCT

Product: arginine deiminase

Products: L-citrulline; NH3

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MIAEWGKLRAVGMHKPGLEVMLGLLDPSSFLYERQFNWSKARREHDNLRRVLKEEGVKIYRLRQTIVNKIRRDDRFREKV
IEKVGVNNDDPEFLVELLILRPILGYEKRDKGTHLEVKLTDPLSNLYFMRDQQITTEKGIIMGRMATHQREKEVEVMKLF
WEALNIKYKEIGRGKFEGGDFFPMGDFNLVGVGVRTDLEGVSELFNILNGGEIGIIHWNREEFIHLDTFFNVGSSSSVVS
VRSFMEESRVAVYYDRKIIRETTLYDYVVKEKGFNLIEVSVDEAKKYVTNFLTIDDGKIVSPKISANRKLEKEYDVIEVE
VSNLTGGAGGIHCMTAVIRRD

Sequences:

>Translated_341_residues
MIAEWGKLRAVGMHKPGLEVMLGLLDPSSFLYERQFNWSKARREHDNLRRVLKEEGVKIYRLRQTIVNKIRRDDRFREKV
IEKVGVNNDDPEFLVELLILRPILGYEKRDKGTHLEVKLTDPLSNLYFMRDQQITTEKGIIMGRMATHQREKEVEVMKLF
WEALNIKYKEIGRGKFEGGDFFPMGDFNLVGVGVRTDLEGVSELFNILNGGEIGIIHWNREEFIHLDTFFNVGSSSSVVS
VRSFMEESRVAVYYDRKIIRETTLYDYVVKEKGFNLIEVSVDEAKKYVTNFLTIDDGKIVSPKISANRKLEKEYDVIEVE
VSNLTGGAGGIHCMTAVIRRD
>Mature_341_residues
MIAEWGKLRAVGMHKPGLEVMLGLLDPSSFLYERQFNWSKARREHDNLRRVLKEEGVKIYRLRQTIVNKIRRDDRFREKV
IEKVGVNNDDPEFLVELLILRPILGYEKRDKGTHLEVKLTDPLSNLYFMRDQQITTEKGIIMGRMATHQREKEVEVMKLF
WEALNIKYKEIGRGKFEGGDFFPMGDFNLVGVGVRTDLEGVSELFNILNGGEIGIIHWNREEFIHLDTFFNVGSSSSVVS
VRSFMEESRVAVYYDRKIIRETTLYDYVVKEKGFNLIEVSVDEAKKYVTNFLTIDDGKIVSPKISANRKLEKEYDVIEVE
VSNLTGGAGGIHCMTAVIRRD

Specific function: Unknown

COG id: COG2235

COG function: function code E; Arginine deiminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DDAH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003198 [H]

Pfam domain/function: PF02274 Amidinotransf [H]

EC number: 3.5.3.6

Molecular weight: Translated: 39449; Mature: 39449

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAEWGKLRAVGMHKPGLEVMLGLLDPSSFLYERQFNWSKARREHDNLRRVLKEEGVKIY
CCCCCCCEEEECCCCCCHHHHEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEE
RLRQTIVNKIRRDDRFREKVIEKVGVNNDDPEFLVELLILRPILGYEKRDKGTHLEVKLT
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
DPLSNLYFMRDQQITTEKGIIMGRMATHQREKEVEVMKLFWEALNIKYKEIGRGKFEGGD
CCHHHHEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCC
FFPMGDFNLVGVGVRTDLEGVSELFNILNGGEIGIIHWNREEFIHLDTFFNVGSSSSVVS
CCCCCCCEEEEEEHHCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHCCCCCCCCHHH
VRSFMEESRVAVYYDRKIIRETTLYDYVVKEKGFNLIEVSVDEAKKYVTNFLTIDDGKIV
HHHHHHHCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHEEEECCCEEE
SPKISANRKLEKEYDVIEVEVSNLTGGAGGIHCMTAVIRRD
CCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIAEWGKLRAVGMHKPGLEVMLGLLDPSSFLYERQFNWSKARREHDNLRRVLKEEGVKIY
CCCCCCCEEEECCCCCCHHHHEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEE
RLRQTIVNKIRRDDRFREKVIEKVGVNNDDPEFLVELLILRPILGYEKRDKGTHLEVKLT
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
DPLSNLYFMRDQQITTEKGIIMGRMATHQREKEVEVMKLFWEALNIKYKEIGRGKFEGGD
CCHHHHEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCC
FFPMGDFNLVGVGVRTDLEGVSELFNILNGGEIGIIHWNREEFIHLDTFFNVGSSSSVVS
CCCCCCCEEEEEEHHCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHCCCCCCCCHHH
VRSFMEESRVAVYYDRKIIRETTLYDYVVKEKGFNLIEVSVDEAKKYVTNFLTIDDGKIV
HHHHHHHCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHEEEECCCEEE
SPKISANRKLEKEYDVIEVEVSNLTGGAGGIHCMTAVIRRD
CCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-arginine; H2O

Specific reaction: L-arginine + H2O = L-citrulline + NH3

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]