Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is prsE2 [H]
Identifier: 15889959
GI number: 15889959
Start: 2689324
End: 2690637
Strand: Direct
Name: prsE2 [H]
Synonym: Atu2706
Alternate gene names: 15889959
Gene position: 2689324-2690637 (Clockwise)
Preceding gene: 159185337
Following gene: 15889960
Centisome position: 94.64
GC content: 54.79
Gene sequence:
>1314_bases ATGGCTGATGCAGAAAAAACCGGTACGACGAATTCATCCATTCTCAGGCACTCGGCCGCCGTGGTCGTCCTCGGTCTCGG CCTTCTCGTCGGAATGGGCGGCTGGGCGGCTTTCGCAAAGCTTGCCGGCGCCGTGGTGGCCACGGGCCGGGTGGTCGTTG AAGGCAATTCCAAAAAAATCCAGCATCTTTCCGGCGGCATCGTCAGTGAGATCAATGTCGTCGAAGGCGACAGGGTCGCG GCTGGTCAGATTCTGTTACGGCTGAGCGCCACGGTCGTTCAGGCAAACCTCTCAATTATTGAGAATACGCTTGCGCAACT CTATTCGCGTCGGGCGCGCCTGCGGGCAGAGATTGCCGAAGAACCCTCTTTCACCGTGACCGAAGACCTGACGGCACTGA CGAGTTCGAAGTCCGCCAAAACCTTCATCGATAGCGAACAGAACCTTTTCAACAGTCGTCGCAACGCGTTGATCGGCATG AAAAAGCAGCTTGCCACACGCAAGCTTCAACTGGCCGACGAGGCACGTGGCCTCGACGTACAGGTTGAGGCCACGGAAAA CGAACTCGCCATTGTGAAGGAAGATGTCTCCAAGACAGATGAGCTCTTGAAAAAAGGACTCGTCACGCTCCAGCGCCTCA ATCTCCTCAAACGCCAGCTTTCCAATCTTGAAGGTCAGCAGGGCCAATATATCGCGGCTCGTGCGCAGACCGTGGGCAAG CTGAGCGAACTGGACCTGCAATTGCTTCAACTCGACGAAGACCGAAAATCGGAAGTCACGAAAGATCTGACATCGATCGA AGCAACCGTTGCCGAATATGAAGAACGGCTGGCGGCAACACGCGACCAGCTAGATCGTCTCGACATCCGCTCACCGATTG CCGGTCGTATCTATCAACTTTCAGTGCACAACATAAACGGCGTCATCCAACCCGGTGAAGTGCTGATGCTGGTGGTTCCT GACAAGGATGATCTTGCAATCGAAGCCAATATAACTCCGCGAGACATCGATCAGATTTATGTCGGGCAGCCGGTCACCGT TCGCTTCACGGCGTTCAATCAAAGCACGACACCGGACTTGAGCGCGGAAGTTGCTGTGGTCGCCCCTGATCTGCAGACAG ATTCCCGAACTGGCACATCTTATTACGTCCTGCGCATCAGACCTAACAAAGCTGGCATGGGGCATCTACCTGGCGGGAAG TTGTATCCTGGCATGCCGGCGGAAGTATTTATCCAGACCAGCGAGAGAAGTGTTCTCTCCTATTTTGTGAAGCCGTTCCA GGACAGACTCAAAAAGACCTTCGTGCAGGAATAG
Upstream 100 bases:
>100_bases GGCACCAAGGAAGAGGTGCTTGCACAAATCCTGCGGCAGAATATCCGCCAAGTGCCCGAGGGGGAAGAAACGCGCAAGAT TGAAAACCGGGTGAGCGAAA
Downstream 100 bases:
>100_bases TTTCTTACTTTTTAAGCAAAAAATAGAAAAATTTTCAACACACCAAATACGCGATTTTTTTGAAAATACGATTTTCTTAT ATTGTATTATGGTTTTTTAT
Product: HlyD family secretion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MADAEKTGTTNSSILRHSAAVVVLGLGLLVGMGGWAAFAKLAGAVVATGRVVVEGNSKKIQHLSGGIVSEINVVEGDRVA AGQILLRLSATVVQANLSIIENTLAQLYSRRARLRAEIAEEPSFTVTEDLTALTSSKSAKTFIDSEQNLFNSRRNALIGM KKQLATRKLQLADEARGLDVQVEATENELAIVKEDVSKTDELLKKGLVTLQRLNLLKRQLSNLEGQQGQYIAARAQTVGK LSELDLQLLQLDEDRKSEVTKDLTSIEATVAEYEERLAATRDQLDRLDIRSPIAGRIYQLSVHNINGVIQPGEVLMLVVP DKDDLAIEANITPRDIDQIYVGQPVTVRFTAFNQSTTPDLSAEVAVVAPDLQTDSRTGTSYYVLRIRPNKAGMGHLPGGK LYPGMPAEVFIQTSERSVLSYFVKPFQDRLKKTFVQE
Sequences:
>Translated_437_residues MADAEKTGTTNSSILRHSAAVVVLGLGLLVGMGGWAAFAKLAGAVVATGRVVVEGNSKKIQHLSGGIVSEINVVEGDRVA AGQILLRLSATVVQANLSIIENTLAQLYSRRARLRAEIAEEPSFTVTEDLTALTSSKSAKTFIDSEQNLFNSRRNALIGM KKQLATRKLQLADEARGLDVQVEATENELAIVKEDVSKTDELLKKGLVTLQRLNLLKRQLSNLEGQQGQYIAARAQTVGK LSELDLQLLQLDEDRKSEVTKDLTSIEATVAEYEERLAATRDQLDRLDIRSPIAGRIYQLSVHNINGVIQPGEVLMLVVP DKDDLAIEANITPRDIDQIYVGQPVTVRFTAFNQSTTPDLSAEVAVVAPDLQTDSRTGTSYYVLRIRPNKAGMGHLPGGK LYPGMPAEVFIQTSERSVLSYFVKPFQDRLKKTFVQE >Mature_436_residues ADAEKTGTTNSSILRHSAAVVVLGLGLLVGMGGWAAFAKLAGAVVATGRVVVEGNSKKIQHLSGGIVSEINVVEGDRVAA GQILLRLSATVVQANLSIIENTLAQLYSRRARLRAEIAEEPSFTVTEDLTALTSSKSAKTFIDSEQNLFNSRRNALIGMK KQLATRKLQLADEARGLDVQVEATENELAIVKEDVSKTDELLKKGLVTLQRLNLLKRQLSNLEGQQGQYIAARAQTVGKL SELDLQLLQLDEDRKSEVTKDLTSIEATVAEYEERLAATRDQLDRLDIRSPIAGRIYQLSVHNINGVIQPGEVLMLVVPD KDDLAIEANITPRDIDQIYVGQPVTVRFTAFNQSTTPDLSAEVAVVAPDLQTDSRTGTSYYVLRIRPNKAGMGHLPGGKL YPGMPAEVFIQTSERSVLSYFVKPFQDRLKKTFVQE
Specific function: Involved in the secretion of proteases A, B, C and G [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 47734; Mature: 47603
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAEKTGTTNSSILRHSAAVVVLGLGLLVGMGGWAAFAKLAGAVVATGRVVVEGNSKKI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCEEEEECCCCHH QHLSGGIVSEINVVEGDRVAAGQILLRLSATVVQANLSIIENTLAQLYSRRARLRAEIAE HHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EPSFTVTEDLTALTSSKSAKTFIDSEQNLFNSRRNALIGMKKQLATRKLQLADEARGLDV CCCCEEHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE QVEATENELAIVKEDVSKTDELLKKGLVTLQRLNLLKRQLSNLEGQQGQYIAARAQTVGK EEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHH LSELDLQLLQLDEDRKSEVTKDLTSIEATVAEYEERLAATRDQLDRLDIRSPIAGRIYQL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE SVHNINGVIQPGEVLMLVVPDKDDLAIEANITPRDIDQIYVGQPVTVRFTAFNQSTTPDL EEECCCCEECCCCEEEEEECCCCCEEEEECCCHHCCCCEECCCCEEEEEEEECCCCCCCC SAEVAVVAPDLQTDSRTGTSYYVLRIRPNKAGMGHLPGGKLYPGMPAEVFIQTSERSVLS CCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHH YFVKPFQDRLKKTFVQE HHHHHHHHHHHHHHCCC >Mature Secondary Structure ADAEKTGTTNSSILRHSAAVVVLGLGLLVGMGGWAAFAKLAGAVVATGRVVVEGNSKKI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCEEEEECCCCHH QHLSGGIVSEINVVEGDRVAAGQILLRLSATVVQANLSIIENTLAQLYSRRARLRAEIAE HHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EPSFTVTEDLTALTSSKSAKTFIDSEQNLFNSRRNALIGMKKQLATRKLQLADEARGLDV CCCCEEHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE QVEATENELAIVKEDVSKTDELLKKGLVTLQRLNLLKRQLSNLEGQQGQYIAARAQTVGK EEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHH LSELDLQLLQLDEDRKSEVTKDLTSIEATVAEYEERLAATRDQLDRLDIRSPIAGRIYQL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE SVHNINGVIQPGEVLMLVVPDKDDLAIEANITPRDIDQIYVGQPVTVRFTAFNQSTTPDL EEECCCCEECCCCEEEEEECCCCCEEEEECCCHHCCCCEECCCCEEEEEEEECCCCCCCC SAEVAVVAPDLQTDSRTGTSYYVLRIRPNKAGMGHLPGGKLYPGMPAEVFIQTSERSVLS CCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHH YFVKPFQDRLKKTFVQE HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2184029 [H]