Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889903
Identifier: 15889903
GI number: 15889903
Start: 2632044
End: 2632688
Strand: Reverse
Name: 15889903
Synonym: Atu2647
Alternate gene names: NA
Gene position: 2632688-2632044 (Counterclockwise)
Preceding gene: 15889904
Following gene: 159185307
Centisome position: 92.65
GC content: 62.33
Gene sequence:
>645_bases GTGAGGACCGATCCCGAGCGCTTCATTCTCGACAATGCTGCCATCATGCATCCGCCGCATGTGCCGGAATTGCGTCTTCA TCTCGCCACCGAGGCGCACGAGCTTTGGCTGAAGACGGAGGAGGAACTGGAGGAGATCGGCCTGCCGCCGCCCTTCTGGG CCTTCGCCTGGGCCGGCGGGCAGGGGCTTGCCCGTTATATTCTCGATCACCCTGAAAGCGTTTGCGGCAAGCGTGTGCTG GATTTCGCCAGTGGCTCCGGTCTGGTTGCCATCGCGGCGGCAAAGGCCGGTGCAGCAAAGGTTCTCGCTGCCGACATCGA TCCGTGGACGGAAACGGCCATTCGCTTGAATGCGGCGCTCAATGGCGTGGATATCGGTTTTACGGGGCTCGACCTCGTCG GCAAGCCGGTCGATGCCGATGTCCTCTTGGCTGGCGACGTGTTCTACGACCGCGCTTTTGCCGATCTTCTCGTGCCGTGG TTTGTGGAGCTGACGGAGAAGGGTATGATCGTGCTCGTCGGCGATCCGGGACGGGCCTATCTGCCCAAAGAGCGGCTTCG CGCCGAGGCGACCTATCAGGTGCCGGTGACGCGGGCGCTGGAAGACAGCGACGTGAAGAAGACCACGGTGTGGCGTTTTA TCTGA
Upstream 100 bases:
>100_bases ATGCGGCTTTCCGTGCAGCCGGTGACGGAAGAGGAATATCTTGAGGTCTGCCGCATGGGCGGCCTCGCCAATCCGCCGAA ATCGCCGGACTGATGCTTCG
Downstream 100 bases:
>100_bases TCAGGGCCTGATGATGCAGACGCCATGTTCGTATGCGCAGGCATCGTCTGCGTTTTCGGCATGGACAGAGATGATTTTCG CCTTGGGCGCAAGTTGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Small; Methyltransferase Protein; Methyltransferase; Methyltransferase Type; SAM-Dependent Methyltransferease Protein; Methyltransferase-Like Protein; C12orf72 Protein
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MRTDPERFILDNAAIMHPPHVPELRLHLATEAHELWLKTEEELEEIGLPPPFWAFAWAGGQGLARYILDHPESVCGKRVL DFASGSGLVAIAAAKAGAAKVLAADIDPWTETAIRLNAALNGVDIGFTGLDLVGKPVDADVLLAGDVFYDRAFADLLVPW FVELTEKGMIVLVGDPGRAYLPKERLRAEATYQVPVTRALEDSDVKKTTVWRFI
Sequences:
>Translated_214_residues MRTDPERFILDNAAIMHPPHVPELRLHLATEAHELWLKTEEELEEIGLPPPFWAFAWAGGQGLARYILDHPESVCGKRVL DFASGSGLVAIAAAKAGAAKVLAADIDPWTETAIRLNAALNGVDIGFTGLDLVGKPVDADVLLAGDVFYDRAFADLLVPW FVELTEKGMIVLVGDPGRAYLPKERLRAEATYQVPVTRALEDSDVKKTTVWRFI >Mature_214_residues MRTDPERFILDNAAIMHPPHVPELRLHLATEAHELWLKTEEELEEIGLPPPFWAFAWAGGQGLARYILDHPESVCGKRVL DFASGSGLVAIAAAKAGAAKVLAADIDPWTETAIRLNAALNGVDIGFTGLDLVGKPVDADVLLAGDVFYDRAFADLLVPW FVELTEKGMIVLVGDPGRAYLPKERLRAEATYQVPVTRALEDSDVKKTTVWRFI
Specific function: Unknown
COG id: COG3897
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI209529731, Length=223, Percent_Identity=35.8744394618834, Blast_Score=112, Evalue=2e-25, Organism=Homo sapiens, GI209529729, Length=223, Percent_Identity=35.8744394618834, Blast_Score=112, Evalue=2e-25, Organism=Homo sapiens, GI28603834, Length=223, Percent_Identity=35.8744394618834, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI115533699, Length=190, Percent_Identity=35.7894736842105, Blast_Score=120, Evalue=4e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23481; Mature: 23481
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTDPERFILDNAAIMHPPHVPELRLHLATEAHELWLKTEEELEEIGLPPPFWAFAWAGG CCCCCCCEEECCCEEECCCCCCCEEEEEHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECC QGLARYILDHPESVCGKRVLDFASGSGLVAIAAAKAGAAKVLAADIDPWTETAIRLNAAL HHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCHHHHHEEEEEEC NGVDIGFTGLDLVGKPVDADVLLAGDVFYDRAFADLLVPWFVELTEKGMIVLVGDPGRAY CCEECCCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC LPKERLRAEATYQVPVTRALEDSDVKKTTVWRFI CCHHHHCCCCEEECCHHCCCCCCCCCCCEEEECC >Mature Secondary Structure MRTDPERFILDNAAIMHPPHVPELRLHLATEAHELWLKTEEELEEIGLPPPFWAFAWAGG CCCCCCCEEECCCEEECCCCCCCEEEEEHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECC QGLARYILDHPESVCGKRVLDFASGSGLVAIAAAKAGAAKVLAADIDPWTETAIRLNAAL HHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCHHHHHEEEEEEC NGVDIGFTGLDLVGKPVDADVLLAGDVFYDRAFADLLVPWFVELTEKGMIVLVGDPGRAY CCEECCCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC LPKERLRAEATYQVPVTRALEDSDVKKTTVWRFI CCHHHHCCCCEEECCHHCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA