Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15889902

Identifier: 15889902

GI number: 15889902

Start: 2631666

End: 2632043

Strand: Direct

Name: 15889902

Synonym: Atu2646

Alternate gene names: NA

Gene position: 2631666-2632043 (Clockwise)

Preceding gene: 15889884

Following gene: 15889908

Centisome position: 92.61

GC content: 56.08

Gene sequence:

>378_bases
ATGAAGCTCATGTTACAGCGCCGAATCGCCGCCCTGATCATGATGGTTGCAGGCGCCATTTTAACCTTTGTGCCACCGGC
AGCGGCAGAAGATTTTTATGGCCGCCACCCATATCGGCATCATCAATCCGAAGTAAGCTTCTCTACCGATGGGTTGCCAT
CCGCCCTGCCCGGCGGCACCTATGTCGGCGGCATATCGGCCCTGCGGGTGCGTGGAAACGGCAATTATTTCGCGATCAGC
AGCGGATTTTCACGAAAAGGTATTACGGATCGAGCGGGCCTGCAACTTGCGCCCAAGGCGAAAATCATCTCTGTCCATGC
CGAAAACGCAGACGATGCCTGCGCATACGAACATGGCGTCTGCATCATCAGGCCCTGA

Upstream 100 bases:

>100_bases
AAAAATCGAGCGTTTCCAAGATTTACGCCCTCAAAATATTTACCTTTACGTAATTCAGAAAAGGTGTAATTTACGAGCGG
TTAACCAATAAAACCGGAGC

Downstream 100 bases:

>100_bases
TCAGATAAAACGCCACACCGTGGTCTTCTTCACGTCGCTGTCTTCCAGCGCCCGCGTCACCGGCACCTGATAGGTCGCCT
CGGCGCGAAGCCGCTCTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKLMLQRRIAALIMMVAGAILTFVPPAAAEDFYGRHPYRHHQSEVSFSTDGLPSALPGGTYVGGISALRVRGNGNYFAIS
SGFSRKGITDRAGLQLAPKAKIISVHAENADDACAYEHGVCIIRP

Sequences:

>Translated_125_residues
MKLMLQRRIAALIMMVAGAILTFVPPAAAEDFYGRHPYRHHQSEVSFSTDGLPSALPGGTYVGGISALRVRGNGNYFAIS
SGFSRKGITDRAGLQLAPKAKIISVHAENADDACAYEHGVCIIRP
>Mature_125_residues
MKLMLQRRIAALIMMVAGAILTFVPPAAAEDFYGRHPYRHHQSEVSFSTDGLPSALPGGTYVGGISALRVRGNGNYFAIS
SGFSRKGITDRAGLQLAPKAKIISVHAENADDACAYEHGVCIIRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13386; Mature: 13386

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLMLQRRIAALIMMVAGAILTFVPPAAAEDFYGRHPYRHHQSEVSFSTDGLPSALPGGT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YVGGISALRVRGNGNYFAISSGFSRKGITDRAGLQLAPKAKIISVHAENADDACAYEHGV
EECCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCHHHCCE
CIIRP
EEEEC
>Mature Secondary Structure
MKLMLQRRIAALIMMVAGAILTFVPPAAAEDFYGRHPYRHHQSEVSFSTDGLPSALPGGT
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YVGGISALRVRGNGNYFAISSGFSRKGITDRAGLQLAPKAKIISVHAENADDACAYEHGV
EECCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCHHHCCE
CIIRP
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA