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The map label for this gene is ytfM [H]

Identifier: 15889871

GI number: 15889871

Start: 2594173

End: 2596098

Strand: Direct

Name: ytfM [H]

Synonym: Atu2615

Alternate gene names: 15889871

Gene position: 2594173-2596098 (Clockwise)

Preceding gene: 159185291

Following gene: 159185292

Centisome position: 91.29

GC content: 59.19

Gene sequence:

>1926_bases
ATGCGAAGAACACGAACTAACCCGAAGACAGGTATTGCGTATCGGAAAGCTGGCACCGCGCTTGCGGTTGCTTTGACGTT
CGCCCTGTATCCGGCGTTTGCCCGTGATGCTTTCGCCTTCAAACTGTTCGGCATGCGCCTCTGGGGTTCGGAAGAACCGG
AGGTCGAAGTTATCAACCCGGTCAAATATGCCGTCACGCTTGACGCGGCCGACGCCGACAAGTCCCTGAAGAGCAGTCTG
GAAAACAGCTCGCTTCTTCTGGCCGACAAGGACAAACCTGCCTCCGGCGATCTCGGCCTTCTGATAAAGGCGCGAGACGA
CAGGGACAGGCTGATCGCGGCACTTTATGAAAACGCCCGTTACGGCGGCATCGTCAACGTGACCGTGGCCGGAAAGAACG
TTGATGACCTGCCTCCCAACCCGGTTTTCGATCACAGCACGCCTGTACCCATGGTCATAACGGTAACGCCGGGCCCGAAA
TTCACCCTCGGCAACGTTCGCCTTGAAGGCGATGTAACGGGCCGCAATCTTGATGAATACGGCCTGATCGCCGGCGGTGA
TGCCGGGTCTCTGGCAATTATCCGCGCCGGCAACAAGCTGATCGATGATCTGAAGGCGGAAGGCCGGCCGCTCGCGAAAC
TGACGAAACGCGAGGCGGTCGCAAACCACGCGACGAATACGGTCGACATTACAATGGCAGCTGAAGGTGGCCCCGTCGCG
CCGCTCGGCGCAGTCACCGTCACCGGCGAAAAAACCGTCGATGGCGACTTCATTCGCCGTTATTCGCGCCTTAATGGCGG
CGAGCCCTATTCGCCGGAAAAGCTGCGCAAGGCCGCCGACCGCCTGCGCCAGCTCGGCGTCTTTTCCAGCCTGACGATCA
AGGAAGCGGGAACGCTTGCCCGCGACGGCACCATTCCGCTCACCATCGAAGTGTCCGAAGGCAAGCACCGTTATTTTGGC
GTCGGCGCGCAATATTCGACGACCGAAGGTATCGGGCTTCAAGGATATTGGGGTCACCGTAACCTCTTCGGACAGGCGGA
ATCACTGCGCATCGAAGGCTCTGTCTCGCGTATTGCGGAGGCATCGAGCGTCGAAGGCATGGATTATTCGGCGGGCATTA
CCTTCACCAAGCCGGGGATGTTCAACCCCCGCACGACGTTCAAGACCAGCCTGATTGCCAAGACCGAAAACCCGGACACC
TACAGGGCCAAAACGCTGACGGGCACGGCGGGTTTCGCCTACGAACTGAACGATACGGATACAGCCGCCGCGGGTCTGGA
GGTCCAATGGGCCGATACCGAAGATGCATTCGGCAAAAACGAATATCTGACGACCTCGATACCGCTGGAATTTGTGCGCG
ACACGCGCGACGATAAGCTTAATCCGACCGAAGGTTTTCGCGCATCCTTGGCCGCCAAGCCAAGCTATGAAGCGCTCAAT
GGCACGTTCTTCTCCTCTTTCGAAGGCTCTATCACCGGCTATAAGGGACTTGGTGCCGAAGACCGGTTGATCATGGCAGG
AAAGCTCTCCGGCGGTGTTCTGGTGGGCGGCAGCGATCTACAGGATATACCGACCACCCGCCGCTTTTTCGCCGGTGGCG
GCGGATCGGTGCGCGGCTATAGCTACCAGGAGATTTCGCCCTATAATGCGGCGGGCGATGCGACTGGCGGCCGCTCCTAC
GTGGTTGGCTCCGTTGAGGCCCGCATCAAGGTCACCGATACCATCGGCCTTGTGCCGTTTTTCGACGCCGGCGTCGTTTC
TGATGGGGTAACACCCGATTTCTCCGATATCCGGGCCGGTGCCGGTATCGGCCTGCGTTACGCGACGCCCTTCGGGCCTC
TGCGTCTCGATGTCGCCATGCCGCTCGAAAAATACGACGGCGGCAACAATTTCGGCATTTATGCTGGCATCGGCCAGTCT
TTTTAA

Upstream 100 bases:

>100_bases
CGCGAGGGTCCTCAAAGCCGTTTATTTATGATTAAATTGCAATGTTAACGGACAGGAAACGGGTTAGGGCGACAATAAAT
GCTCAACCATAAAGCAGCTT

Downstream 100 bases:

>100_bases
ACGCCGCAGTCGAACACCCTTGCAACAGAGTGTAGATTACCCTTGATGAAAACGTTGATTCGATTGCTGAAATGGCTAGG
CTACGCTGCACTCTGCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 641; Mature: 641

Protein sequence:

>641_residues
MRRTRTNPKTGIAYRKAGTALAVALTFALYPAFARDAFAFKLFGMRLWGSEEPEVEVINPVKYAVTLDAADADKSLKSSL
ENSSLLLADKDKPASGDLGLLIKARDDRDRLIAALYENARYGGIVNVTVAGKNVDDLPPNPVFDHSTPVPMVITVTPGPK
FTLGNVRLEGDVTGRNLDEYGLIAGGDAGSLAIIRAGNKLIDDLKAEGRPLAKLTKREAVANHATNTVDITMAAEGGPVA
PLGAVTVTGEKTVDGDFIRRYSRLNGGEPYSPEKLRKAADRLRQLGVFSSLTIKEAGTLARDGTIPLTIEVSEGKHRYFG
VGAQYSTTEGIGLQGYWGHRNLFGQAESLRIEGSVSRIAEASSVEGMDYSAGITFTKPGMFNPRTTFKTSLIAKTENPDT
YRAKTLTGTAGFAYELNDTDTAAAGLEVQWADTEDAFGKNEYLTTSIPLEFVRDTRDDKLNPTEGFRASLAAKPSYEALN
GTFFSSFEGSITGYKGLGAEDRLIMAGKLSGGVLVGGSDLQDIPTTRRFFAGGGGSVRGYSYQEISPYNAAGDATGGRSY
VVGSVEARIKVTDTIGLVPFFDAGVVSDGVTPDFSDIRAGAGIGLRYATPFGPLRLDVAMPLEKYDGGNNFGIYAGIGQS
F

Sequences:

>Translated_641_residues
MRRTRTNPKTGIAYRKAGTALAVALTFALYPAFARDAFAFKLFGMRLWGSEEPEVEVINPVKYAVTLDAADADKSLKSSL
ENSSLLLADKDKPASGDLGLLIKARDDRDRLIAALYENARYGGIVNVTVAGKNVDDLPPNPVFDHSTPVPMVITVTPGPK
FTLGNVRLEGDVTGRNLDEYGLIAGGDAGSLAIIRAGNKLIDDLKAEGRPLAKLTKREAVANHATNTVDITMAAEGGPVA
PLGAVTVTGEKTVDGDFIRRYSRLNGGEPYSPEKLRKAADRLRQLGVFSSLTIKEAGTLARDGTIPLTIEVSEGKHRYFG
VGAQYSTTEGIGLQGYWGHRNLFGQAESLRIEGSVSRIAEASSVEGMDYSAGITFTKPGMFNPRTTFKTSLIAKTENPDT
YRAKTLTGTAGFAYELNDTDTAAAGLEVQWADTEDAFGKNEYLTTSIPLEFVRDTRDDKLNPTEGFRASLAAKPSYEALN
GTFFSSFEGSITGYKGLGAEDRLIMAGKLSGGVLVGGSDLQDIPTTRRFFAGGGGSVRGYSYQEISPYNAAGDATGGRSY
VVGSVEARIKVTDTIGLVPFFDAGVVSDGVTPDFSDIRAGAGIGLRYATPFGPLRLDVAMPLEKYDGGNNFGIYAGIGQS
F
>Mature_641_residues
MRRTRTNPKTGIAYRKAGTALAVALTFALYPAFARDAFAFKLFGMRLWGSEEPEVEVINPVKYAVTLDAADADKSLKSSL
ENSSLLLADKDKPASGDLGLLIKARDDRDRLIAALYENARYGGIVNVTVAGKNVDDLPPNPVFDHSTPVPMVITVTPGPK
FTLGNVRLEGDVTGRNLDEYGLIAGGDAGSLAIIRAGNKLIDDLKAEGRPLAKLTKREAVANHATNTVDITMAAEGGPVA
PLGAVTVTGEKTVDGDFIRRYSRLNGGEPYSPEKLRKAADRLRQLGVFSSLTIKEAGTLARDGTIPLTIEVSEGKHRYFG
VGAQYSTTEGIGLQGYWGHRNLFGQAESLRIEGSVSRIAEASSVEGMDYSAGITFTKPGMFNPRTTFKTSLIAKTENPDT
YRAKTLTGTAGFAYELNDTDTAAAGLEVQWADTEDAFGKNEYLTTSIPLEFVRDTRDDKLNPTEGFRASLAAKPSYEALN
GTFFSSFEGSITGYKGLGAEDRLIMAGKLSGGVLVGGSDLQDIPTTRRFFAGGGGSVRGYSYQEISPYNAAGDATGGRSY
VVGSVEARIKVTDTIGLVPFFDAGVVSDGVTPDFSDIRAGAGIGLRYATPFGPLRLDVAMPLEKYDGGNNFGIYAGIGQS
F

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=411, Percent_Identity=27.9805352798054, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 68281; Mature: 68281

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTRTNPKTGIAYRKAGTALAVALTFALYPAFARDAFAFKLFGMRLWGSEEPEVEVINP
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCEEEECC
VKYAVTLDAADADKSLKSSLENSSLLLADKDKPASGDLGLLIKARDDRDRLIAALYENAR
EEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCCC
YGGIVNVTVAGKNVDDLPPNPVFDHSTPVPMVITVTPGPKFTLGNVRLEGDVTGRNLDEY
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCEEEECCCCCCCCCCC
GLIAGGDAGSLAIIRAGNKLIDDLKAEGRPLAKLTKREAVANHATNTVDITMAAEGGPVA
CEEECCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
PLGAVTVTGEKTVDGDFIRRYSRLNGGEPYSPEKLRKAADRLRQLGVFSSLTIKEAGTLA
CCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHEEEEHHCCCEE
RDGTIPLTIEVSEGKHRYFGVGAQYSTTEGIGLQGYWGHRNLFGQAESLRIEGSVSRIAE
CCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCHHHHHH
ASSVEGMDYSAGITFTKPGMFNPRTTFKTSLIAKTENPDTYRAKTLTGTAGFAYELNDTD
HCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCC
TAAAGLEVQWADTEDAFGKNEYLTTSIPLEFVRDTRDDKLNPTEGFRASLAAKPSYEALN
CHHCCEEEEECCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHC
GTFFSSFEGSITGYKGLGAEDRLIMAGKLSGGVLVGGSDLQDIPTTRRFFAGGGGSVRGY
CEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCHHEEECCCCCCCCC
SYQEISPYNAAGDATGGRSYVVGSVEARIKVTDTIGLVPFFDAGVVSDGVTPDFSDIRAG
CCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCEECCCCCCCCCCCCCHHHHCCC
AGIGLRYATPFGPLRLDVAMPLEKYDGGNNFGIYAGIGQSF
CCCCEEECCCCCCEEEEEECCHHHCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MRRTRTNPKTGIAYRKAGTALAVALTFALYPAFARDAFAFKLFGMRLWGSEEPEVEVINP
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCEEEECC
VKYAVTLDAADADKSLKSSLENSSLLLADKDKPASGDLGLLIKARDDRDRLIAALYENAR
EEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCCC
YGGIVNVTVAGKNVDDLPPNPVFDHSTPVPMVITVTPGPKFTLGNVRLEGDVTGRNLDEY
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEECCEEEECCCCCCCCCCC
GLIAGGDAGSLAIIRAGNKLIDDLKAEGRPLAKLTKREAVANHATNTVDITMAAEGGPVA
CEEECCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
PLGAVTVTGEKTVDGDFIRRYSRLNGGEPYSPEKLRKAADRLRQLGVFSSLTIKEAGTLA
CCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHEEEEHHCCCEE
RDGTIPLTIEVSEGKHRYFGVGAQYSTTEGIGLQGYWGHRNLFGQAESLRIEGSVSRIAE
CCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCHHHHHH
ASSVEGMDYSAGITFTKPGMFNPRTTFKTSLIAKTENPDTYRAKTLTGTAGFAYELNDTD
HCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCC
TAAAGLEVQWADTEDAFGKNEYLTTSIPLEFVRDTRDDKLNPTEGFRASLAAKPSYEALN
CHHCCEEEEECCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHC
GTFFSSFEGSITGYKGLGAEDRLIMAGKLSGGVLVGGSDLQDIPTTRRFFAGGGGSVRGY
CEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCHHEEECCCCCCCCC
SYQEISPYNAAGDATGGRSYVVGSVEARIKVTDTIGLVPFFDAGVVSDGVTPDFSDIRAG
CCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEECCCEECCCCCCCCCCCCCHHHHCCC
AGIGLRYATPFGPLRLDVAMPLEKYDGGNNFGIYAGIGQSF
CCCCEEECCCCCCEEEEEECCHHHCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]