Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889856
Identifier: 15889856
GI number: 15889856
Start: 2578325
End: 2578810
Strand: Direct
Name: 15889856
Synonym: Atu8181
Alternate gene names: NA
Gene position: 2578325-2578810 (Clockwise)
Preceding gene: 159185283
Following gene: 159185288
Centisome position: 90.74
GC content: 58.23
Gene sequence:
>486_bases ATGCGTGATCCATTCAAAAACCCCTTTACCGAAACCGACACCGCCCGCCATTCCATCTGGGAGATGCTGGTGACGCGCGA TATCGATGCCTTCCTCGCTGCCGACTGGTCGAAGGTCGCGGATGATTTCGTCGAGGACGGTTTCCTCGGTATCAATGCCA ATCGCGATGCAAACCCGGACAACTGGCGCCTGTCCTTCCCCTCGCTCGCCGCCTATCGCGACGAATGGCTGAAACAGGCG AAGGATTTCCAGACCCAGCAATTTTCCGAAGACCCGCGCCATGCGATCTTCACCACCACCACGCTGGAAGAAATCGAACT GGAAGGTGAGACCGCGCTGGTTCGCAAGAAGTTCGACGGCGGGCTTCGCAAGGCCGACGGCAGCTTCGACGCCATGAAAT GGCAAACACTCTATTATTGCCGGCTGCATCAGGGCCGCTGGAAGATCAGCGGCTTTACCGGCTACATGCCCAACCCCATG CCGTGA
Upstream 100 bases:
>100_bases AAATCATTTTCTCTGTTAATTGCGAGATGAGCATATGCCAACAATATTCACCAGAGAAATCTCCAAATCTTGAAAATAAT TTCAACAACGGACCCAGGCC
Downstream 100 bases:
>100_bases TCGAGCCGGCACGCAAGAGAACCTTGAACGCCGGGCCAAAAGCCCGGCGTTGTCTTTTCGCCTCGGGACGACAGACGAAA AGCGCCGAAAACGGATCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MRDPFKNPFTETDTARHSIWEMLVTRDIDAFLAADWSKVADDFVEDGFLGINANRDANPDNWRLSFPSLAAYRDEWLKQA KDFQTQQFSEDPRHAIFTTTTLEEIELEGETALVRKKFDGGLRKADGSFDAMKWQTLYYCRLHQGRWKISGFTGYMPNPM P
Sequences:
>Translated_161_residues MRDPFKNPFTETDTARHSIWEMLVTRDIDAFLAADWSKVADDFVEDGFLGINANRDANPDNWRLSFPSLAAYRDEWLKQA KDFQTQQFSEDPRHAIFTTTTLEEIELEGETALVRKKFDGGLRKADGSFDAMKWQTLYYCRLHQGRWKISGFTGYMPNPM P >Mature_161_residues MRDPFKNPFTETDTARHSIWEMLVTRDIDAFLAADWSKVADDFVEDGFLGINANRDANPDNWRLSFPSLAAYRDEWLKQA KDFQTQQFSEDPRHAIFTTTTLEEIELEGETALVRKKFDGGLRKADGSFDAMKWQTLYYCRLHQGRWKISGFTGYMPNPM P
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18724; Mature: 18724
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDPFKNPFTETDTARHSIWEMLVTRDIDAFLAADWSKVADDFVEDGFLGINANRDANPD CCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHCCEEEECCCCCCCCC NWRLSFPSLAAYRDEWLKQAKDFQTQQFSEDPRHAIFTTTTLEEIELEGETALVRKKFDG CEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHEEECCCHHHHHHHHCC GLRKADGSFDAMKWQTLYYCRLHQGRWKISGFTGYMPNPMP CCCCCCCCCCCHHHHEEEEEEEECCEEEECCCCCCCCCCCC >Mature Secondary Structure MRDPFKNPFTETDTARHSIWEMLVTRDIDAFLAADWSKVADDFVEDGFLGINANRDANPD CCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHCCEEEECCCCCCCCC NWRLSFPSLAAYRDEWLKQAKDFQTQQFSEDPRHAIFTTTTLEEIELEGETALVRKKFDG CEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHEEECCCHHHHHHHHCC GLRKADGSFDAMKWQTLYYCRLHQGRWKISGFTGYMPNPMP CCCCCCCCCCCHHHHEEEEEEEECCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA