Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889841
Identifier: 15889841
GI number: 15889841
Start: 2559357
End: 2560100
Strand: Direct
Name: 15889841
Synonym: Atu2584
Alternate gene names: NA
Gene position: 2559357-2560100 (Clockwise)
Preceding gene: 159185277
Following gene: 15889843
Centisome position: 90.07
GC content: 58.87
Gene sequence:
>744_bases ATGAGTCTGAAAAAACTCACCGCGGCACTGGATGAATGCAGTCGGCGCGGCATAAAGGCCGATCTCTGGCTGCGGGACGA CGATGCGGTGGAACCGACGCTCGCTCTCGACATACTGCTTGATCTTTGCGGTAGCTTTTCCGTCCCTGTTACGCTCGCGG TCATTCCCGAGATGACGACGGATAAGCTTGCGACACATCTGGATGCCTCGGATATTGCTGACGTCGCCGTCCATGGCTGG TCACATGTGAATTACGCCGGGGACAAGGAAAAGAAACAGGAACTCGGGCCGCATCGCGACCCGGCCATCGTGCTTGATGA ATTGCAATCCGGACTGGATAAGCTCCACGACCTGCATGGCAGGCGTCTTGTGCCGATGCTGGTGCCGCCGTGGAATCGTG TCGATGCCGGTATCGTGACGAGTTTGGCGGATATCGGATATCGCGCTTTATCCGTCTTCGGCCCCGAGAAAAACACCGTG CCGCCGTGCCTGAACACCCATGTCGATGTCATCGACTGGCACGGCAGCCGCGGCGGCCGTGACAATGATATCCTGTTTTC CGAGACCGCAGCCCGCATACTGCGCACCGCCGAAGAGGGCGGCACGACCGGTATCCTCACCCATCATCTTGTGCATGACG ATACTGTCTGGCGCTTCCTGCGGCAGCTTTTCGAGGTGACGACAGGGCATCCCGCCGCCCGCTGGCGTTCCTCGAACGAT CTCGTCAACGAGATATCACCATGA
Upstream 100 bases:
>100_bases TGGCAAAAGCGGCCCGCCAGTTCGTCATCAATGAACGATCTCTGGAAAACGCCGCAACGACGCTGAACCAAATTCTTTTG CAGGCAAAGGCACGAAGATC
Downstream 100 bases:
>100_bases CTTCCAGGCGATCAGCATCCCGCTGTCCTGCGTGGCAAGTTCCCGCCTGATCGCCTCCACCTCCTCCAGCGGTGCGCGGT CGGCAAGGGTCACGGCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase Family; Glycosyltransferase; Glycosyl Transferase-Like Protein
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSLKKLTAALDECSRRGIKADLWLRDDDAVEPTLALDILLDLCGSFSVPVTLAVIPEMTTDKLATHLDASDIADVAVHGW SHVNYAGDKEKKQELGPHRDPAIVLDELQSGLDKLHDLHGRRLVPMLVPPWNRVDAGIVTSLADIGYRALSVFGPEKNTV PPCLNTHVDVIDWHGSRGGRDNDILFSETAARILRTAEEGGTTGILTHHLVHDDTVWRFLRQLFEVTTGHPAARWRSSND LVNEISP
Sequences:
>Translated_247_residues MSLKKLTAALDECSRRGIKADLWLRDDDAVEPTLALDILLDLCGSFSVPVTLAVIPEMTTDKLATHLDASDIADVAVHGW SHVNYAGDKEKKQELGPHRDPAIVLDELQSGLDKLHDLHGRRLVPMLVPPWNRVDAGIVTSLADIGYRALSVFGPEKNTV PPCLNTHVDVIDWHGSRGGRDNDILFSETAARILRTAEEGGTTGILTHHLVHDDTVWRFLRQLFEVTTGHPAARWRSSND LVNEISP >Mature_246_residues SLKKLTAALDECSRRGIKADLWLRDDDAVEPTLALDILLDLCGSFSVPVTLAVIPEMTTDKLATHLDASDIADVAVHGWS HVNYAGDKEKKQELGPHRDPAIVLDELQSGLDKLHDLHGRRLVPMLVPPWNRVDAGIVTSLADIGYRALSVFGPEKNTVP PCLNTHVDVIDWHGSRGGRDNDILFSETAARILRTAEEGGTTGILTHHLVHDDTVWRFLRQLFEVTTGHPAARWRSSNDL VNEISP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27249; Mature: 27118
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKKLTAALDECSRRGIKADLWLRDDDAVEPTLALDILLDLCGSFSVPVTLAVIPEMTT CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHH DKLATHLDASDIADVAVHGWSHVNYAGDKEKKQELGPHRDPAIVLDELQSGLDKLHDLHG HHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC RRLVPMLVPPWNRVDAGIVTSLADIGYRALSVFGPEKNTVPPCLNTHVDVIDWHGSRGGR CEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEECCCCCCC DNDILFSETAARILRTAEEGGTTGILTHHLVHDDTVWRFLRQLFEVTTGHPAARWRSSND CCCEEHHHHHHHHHHHHHCCCCEEHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHCCCCC LVNEISP HHHHCCC >Mature Secondary Structure SLKKLTAALDECSRRGIKADLWLRDDDAVEPTLALDILLDLCGSFSVPVTLAVIPEMTT CHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHH DKLATHLDASDIADVAVHGWSHVNYAGDKEKKQELGPHRDPAIVLDELQSGLDKLHDLHG HHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC RRLVPMLVPPWNRVDAGIVTSLADIGYRALSVFGPEKNTVPPCLNTHVDVIDWHGSRGGR CEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEECCCCCCC DNDILFSETAARILRTAEEGGTTGILTHHLVHDDTVWRFLRQLFEVTTGHPAARWRSSND CCCEEHHHHHHHHHHHHHCCCCEEHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHCCCCC LVNEISP HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA