Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15889832

Identifier: 15889832

GI number: 15889832

Start: 2545452

End: 2547908

Strand: Direct

Name: 15889832

Synonym: Atu2575

Alternate gene names: NA

Gene position: 2545452-2547908 (Clockwise)

Preceding gene: 159185273

Following gene: 15889834

Centisome position: 89.58

GC content: 60.97

Gene sequence:

>2457_bases
GTGAGGACCTATCTTCCCGGCGAAAGCGAAGAAGTGTTGAGTGAAGGCTGGACGCTGACACTAACGCCCGCCGATGCCTG
CGAGACCCCGTCCGATATTCCGGCATCGCTCGAAAGCCTTCATGTCTCCGTTCCCGGCACCGTGGGGCAAGCGTTGGAAG
CGGCCGGGAAATTCGATCGCCTTGCCCCCGTCGCCCTAAATGACAGGGACGCCTGGTATCGGCTGACGATGATCTCAGAC
GCCCGGGAACGGGCCATCCTGCGCTTCGATGGTCTTTCCACCATTGCCGAGATCTTCTTCAACGGTGAGCTGATTGCCGC
GAGCCAAAGCATGTTCGAAAGGCTGGAAGTGCCGGTCCAGATGACGGGCGCAGACGAGCTTTCGATCTGCTTCCGGGCGC
TGGCACCCCGGCTTGAAAAACCCGGTCCCCGCGCTCGCTGGCGGCCGCAGATGATGAATACGCAGGGGCTGCGGCTGATC
CGTACCACGGCGCTTGGCTATATGCCCGGCTGGTGCCCGGAAATCCATTCCGCAGGCCCGTGGCGACCTATCAGCCTCAT
CAAACAGGACGGCGTGCTGTGCACCCTACGGTCTTCGCTTGACGATACCGGCACGGGAAAGGTCAGCATCGTTCTTCAAG
CGAACCGCGATATACAGTCCGCACGGCTGATTTGTGCTGGTTACAGCATCAATCTTTCGAAGGCTGAAGACGGCAAACTC
CTCGGCGAACTCATCATTCCCGGCGTCGAAATCTGGTGGCCGCACACTCATGGCAGGCCCGCGCTGCACGAGGTCGTTCT
GGAGTTGGACGGCAACCAACACAGGCTCGGACGCACCGGCTTCCGCCAGGTGGAGATCGATCACGGCGAAGACGGCAATG
GTTTCGGCCTCAAGGTAAACGGTCAGCCGGTCTTCTGCCGCGGTGCGGTCTGGACGACGGCCGATATTGTGCGCCTGCCG
GGAACACGGCCGGACTACGAGCCATGGCTAAAAAAAGCCGCCGAAGCCGGTATGAACATGATCCGCGTGGGCGGCACCAT
GGCCTATGAGACGCCGGAATTCTTCGCGCTTTGCGACGAACTTGGCATCATGGTCTGGCAGGATGCCATGCTTGCCAATT
TCGATTACCCGGCGAAGGACGATGGCCTTCGTCAGCATATCGTTATGGAAATCGAGCAACTCCTCGAATCGACGGCACTT
TCTCCATCGTTTGCCATTTTCTGCGGCGGCAGTGAAATGTACCAGCAGGGCGCGATGCTCGGCTTGCCGGAACAGATATG
GAAGGGCACACTGACCGAAGAAATCCTGCCGGAACTGGTCGCCGAAAAGCGGCCGGATGCGGCCTATGTTGCCAATTCCC
CTTCCGGCGGCGCTTTGCCCTTCTTCCCCAATGCCGGCGTGGGCCACTATTACGGCGTTGGTGCCTATTGCCGGCCATTG
GAAGATGCCCGCCGCGCCGATCTGCGTTTCGCCGCCGAATGTCTCGCCTTCGCCAATATTCCGGAACAGGAGACGCTGGA
CAGATATCTTCCCGGCGTGGCCGTTCACGATCCGCGCTGGAAAGCGCGAACACCGCGTGACCGCGGCGCTTCCTGGGATT
TCGAGGATGTCCGCGATCATTATCTGAAGCTGCTTTACGAGGCGGAACCGGATGTGCTGCGGCGGGAAGACGGCGCCCTT
TATCTCGACATGTCGCGCGCCGCGACGGCCGAGGTGATGGAGGCGACGTTCGCCGAATGGCGGCGCAGCGGCTCTTCCTG
TCAGGGCGCTTTGGTCTGGACGCTGCAGGATCTTGTTCCAGGTGCAGGCTGGGGTATCATCGACGCCGCCGGCCGGCCCA
AATCCGTCTGGCATGCGCTGAAAAGAGCGTTCCGCCCCGTTCAGGTCAGCCTTTCCGACGAAGGTACCAACGGGCTCGAC
ATTCACATCCTCAACGATACCGGCGACAGCCTGAATACCATGCTGGAGCTGACCTGCCTGCGCGAAGGTTTACAGCCCGT
CGTTCATGCCAAACGGCCCCTCGCACTGTTGCCGCGAGAGAGCCAGACGATTGCCGCAACCGACCTGTTCGGCGCTTTTT
TCGATACGACCTATGCCTACCGCTTCGGCCCGCCATCCCACGATGTGACAATCGCTCGCCTTCGGGATATTGCAACCGGG
CATGTCATCGCCGACGCCTTCCATTTTCCGCTCGGCCGGAAAAAGGCGCTGCATGCCGCAAACCTTCAGGTCGCAATCAG
CGAAACAAACGGCCACTGGTCCCTCGAAATCGGCACGGACCGGCTGGCGCAATCTGTCCATATCACGGCAGAGGGCTACC
GCGCCTGCGAAAGCTGGTTCCATCTCGGCCCTGGCGAGGCCAGAAAAATCGGCCTTTTACCGGAGACCGCCACAACCGAA
GCCCCTCCCTCCGGAGAGGTCGTGTCACTGGGCTCCAGCCGGCGGTTTTCGTTCTAG

Upstream 100 bases:

>100_bases
AGTTCGATGCGCTGGCCACCGTGCTCGATCCGGCCGCCGATGCATGGGATGGTTTAATGGAAAGCCTTGGCGAAAAACTA
TCTGATGCCAGCGAGGCGGC

Downstream 100 bases:

>100_bases
AGCCAGCCGCTTCACCGTTTCGATATAGATTGTCTTCGCTTCCGGTGTTGAGAGATTGTGATCGGCATCGGGAATGATGG
TCAGCGATACGTTGCGATAG

Product: mannosidase

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Beta-Mannosidase Protein; Glycoside Hydrolase; Mannosidase; Glycoside Hydrolase Family 2 Protein; Glycosidase; Beta-Galactosidase/Beta-Glucuronidase; Beta-Glucuronidase; Exported Glycosyl Hydrolase; O-Glycosyl Hydrolase; Family 2 Glycosyl Hydrolase; Beta-Mannosidase Man2A; Beta-Galactosidase/Beta; Glycosyl Hydrolase; Beta-Mannosidase-Related Protein; BETA-Mannosidase Protein; Glycoside Hydrolase Family 2 TIM Barrel

Number of amino acids: Translated: 818; Mature: 818

Protein sequence:

>818_residues
MRTYLPGESEEVLSEGWTLTLTPADACETPSDIPASLESLHVSVPGTVGQALEAAGKFDRLAPVALNDRDAWYRLTMISD
ARERAILRFDGLSTIAEIFFNGELIAASQSMFERLEVPVQMTGADELSICFRALAPRLEKPGPRARWRPQMMNTQGLRLI
RTTALGYMPGWCPEIHSAGPWRPISLIKQDGVLCTLRSSLDDTGTGKVSIVLQANRDIQSARLICAGYSINLSKAEDGKL
LGELIIPGVEIWWPHTHGRPALHEVVLELDGNQHRLGRTGFRQVEIDHGEDGNGFGLKVNGQPVFCRGAVWTTADIVRLP
GTRPDYEPWLKKAAEAGMNMIRVGGTMAYETPEFFALCDELGIMVWQDAMLANFDYPAKDDGLRQHIVMEIEQLLESTAL
SPSFAIFCGGSEMYQQGAMLGLPEQIWKGTLTEEILPELVAEKRPDAAYVANSPSGGALPFFPNAGVGHYYGVGAYCRPL
EDARRADLRFAAECLAFANIPEQETLDRYLPGVAVHDPRWKARTPRDRGASWDFEDVRDHYLKLLYEAEPDVLRREDGAL
YLDMSRAATAEVMEATFAEWRRSGSSCQGALVWTLQDLVPGAGWGIIDAAGRPKSVWHALKRAFRPVQVSLSDEGTNGLD
IHILNDTGDSLNTMLELTCLREGLQPVVHAKRPLALLPRESQTIAATDLFGAFFDTTYAYRFGPPSHDVTIARLRDIATG
HVIADAFHFPLGRKKALHAANLQVAISETNGHWSLEIGTDRLAQSVHITAEGYRACESWFHLGPGEARKIGLLPETATTE
APPSGEVVSLGSSRRFSF

Sequences:

>Translated_818_residues
MRTYLPGESEEVLSEGWTLTLTPADACETPSDIPASLESLHVSVPGTVGQALEAAGKFDRLAPVALNDRDAWYRLTMISD
ARERAILRFDGLSTIAEIFFNGELIAASQSMFERLEVPVQMTGADELSICFRALAPRLEKPGPRARWRPQMMNTQGLRLI
RTTALGYMPGWCPEIHSAGPWRPISLIKQDGVLCTLRSSLDDTGTGKVSIVLQANRDIQSARLICAGYSINLSKAEDGKL
LGELIIPGVEIWWPHTHGRPALHEVVLELDGNQHRLGRTGFRQVEIDHGEDGNGFGLKVNGQPVFCRGAVWTTADIVRLP
GTRPDYEPWLKKAAEAGMNMIRVGGTMAYETPEFFALCDELGIMVWQDAMLANFDYPAKDDGLRQHIVMEIEQLLESTAL
SPSFAIFCGGSEMYQQGAMLGLPEQIWKGTLTEEILPELVAEKRPDAAYVANSPSGGALPFFPNAGVGHYYGVGAYCRPL
EDARRADLRFAAECLAFANIPEQETLDRYLPGVAVHDPRWKARTPRDRGASWDFEDVRDHYLKLLYEAEPDVLRREDGAL
YLDMSRAATAEVMEATFAEWRRSGSSCQGALVWTLQDLVPGAGWGIIDAAGRPKSVWHALKRAFRPVQVSLSDEGTNGLD
IHILNDTGDSLNTMLELTCLREGLQPVVHAKRPLALLPRESQTIAATDLFGAFFDTTYAYRFGPPSHDVTIARLRDIATG
HVIADAFHFPLGRKKALHAANLQVAISETNGHWSLEIGTDRLAQSVHITAEGYRACESWFHLGPGEARKIGLLPETATTE
APPSGEVVSLGSSRRFSF
>Mature_818_residues
MRTYLPGESEEVLSEGWTLTLTPADACETPSDIPASLESLHVSVPGTVGQALEAAGKFDRLAPVALNDRDAWYRLTMISD
ARERAILRFDGLSTIAEIFFNGELIAASQSMFERLEVPVQMTGADELSICFRALAPRLEKPGPRARWRPQMMNTQGLRLI
RTTALGYMPGWCPEIHSAGPWRPISLIKQDGVLCTLRSSLDDTGTGKVSIVLQANRDIQSARLICAGYSINLSKAEDGKL
LGELIIPGVEIWWPHTHGRPALHEVVLELDGNQHRLGRTGFRQVEIDHGEDGNGFGLKVNGQPVFCRGAVWTTADIVRLP
GTRPDYEPWLKKAAEAGMNMIRVGGTMAYETPEFFALCDELGIMVWQDAMLANFDYPAKDDGLRQHIVMEIEQLLESTAL
SPSFAIFCGGSEMYQQGAMLGLPEQIWKGTLTEEILPELVAEKRPDAAYVANSPSGGALPFFPNAGVGHYYGVGAYCRPL
EDARRADLRFAAECLAFANIPEQETLDRYLPGVAVHDPRWKARTPRDRGASWDFEDVRDHYLKLLYEAEPDVLRREDGAL
YLDMSRAATAEVMEATFAEWRRSGSSCQGALVWTLQDLVPGAGWGIIDAAGRPKSVWHALKRAFRPVQVSLSDEGTNGLD
IHILNDTGDSLNTMLELTCLREGLQPVVHAKRPLALLPRESQTIAATDLFGAFFDTTYAYRFGPPSHDVTIARLRDIATG
HVIADAFHFPLGRKKALHAANLQVAISETNGHWSLEIGTDRLAQSVHITAEGYRACESWFHLGPGEARKIGLLPETATTE
APPSGEVVSLGSSRRFSF

Specific function: Unknown

COG id: COG3250

COG function: function code G; Beta-galactosidase/beta-glucuronidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI84798622, Length=705, Percent_Identity=25.3900709219858, Blast_Score=153, Evalue=7e-37,
Organism=Caenorhabditis elegans, GI17550784, Length=742, Percent_Identity=22.3719676549865, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24643838, Length=733, Percent_Identity=23.8744884038199, Blast_Score=112, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24643840, Length=526, Percent_Identity=25.6653992395437, Blast_Score=99, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90068; Mature: 90068

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTYLPGESEEVLSEGWTLTLTPADACETPSDIPASLESLHVSVPGTVGQALEAAGKFDR
CCCCCCCCHHHHHHCCCEEEECCCHHCCCCCCCCCCHHHEEEECCCHHHHHHHHHCCCCC
LAPVALNDRDAWYRLTMISDARERAILRFDGLSTIAEIFFNGELIAASQSMFERLEVPVQ
CCCEEECCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHCCCEEEHHHHHHHHHCCCEE
MTGADELSICFRALAPRLEKPGPRARWRPQMMNTQGLRLIRTTALGYMPGWCPEIHSAGP
ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCCC
WRPISLIKQDGVLCTLRSSLDDTGTGKVSIVLQANRDIQSARLICAGYSINLSKAEDGKL
CCHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEECEEECCCCCCCHH
LGELIIPGVEIWWPHTHGRPALHEVVLELDGNQHRLGRTGFRQVEIDHGEDGNGFGLKVN
HHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEC
GQPVFCRGAVWTTADIVRLPGTRPDYEPWLKKAAEAGMNMIRVGGTMAYETPEFFALCDE
CCEEEEECCEECCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCEEEECCCHHHHHHHH
LGIMVWQDAMLANFDYPAKDDGLRQHIVMEIEQLLESTALSPSFAIFCGGSEMYQQGAML
HCCEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCC
GLPEQIWKGTLTEEILPELVAEKRPDAAYVANSPSGGALPFFPNAGVGHYYGVGAYCRPL
CCCHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCH
EDARRADLRFAAECLAFANIPEQETLDRYLPGVAVHDPRWKARTPRDRGASWDFEDVRDH
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHH
YLKLLYEAEPDVLRREDGALYLDMSRAATAEVMEATFAEWRRSGSSCQGALVWTLQDLVP
HHHHHHCCCCCHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCC
GAGWGIIDAAGRPKSVWHALKRAFRPVQVSLSDEGTNGLDIHILNDTGDSLNTMLELTCL
CCCCCEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHH
REGLQPVVHAKRPLALLPRESQTIAATDLFGAFFDTTYAYRFGPPSHDVTIARLRDIATG
HHHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHHCCEEEEECCCCCCEEHHHHHHHHCC
HVIADAFHFPLGRKKALHAANLQVAISETNGHWSLEIGTDRLAQSVHITAEGYRACESWF
HHHHHHHHCCCCCCHHEEECCEEEEEEECCCEEEEEECHHHHHCEEEEEHHHHHHHHHHH
HLGPGEARKIGLLPETATTEAPPSGEVVSLGSSRRFSF
CCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MRTYLPGESEEVLSEGWTLTLTPADACETPSDIPASLESLHVSVPGTVGQALEAAGKFDR
CCCCCCCCHHHHHHCCCEEEECCCHHCCCCCCCCCCHHHEEEECCCHHHHHHHHHCCCCC
LAPVALNDRDAWYRLTMISDARERAILRFDGLSTIAEIFFNGELIAASQSMFERLEVPVQ
CCCEEECCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHCCCEEEHHHHHHHHHCCCEE
MTGADELSICFRALAPRLEKPGPRARWRPQMMNTQGLRLIRTTALGYMPGWCPEIHSAGP
ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHCCCCCCCCCCCCCCC
WRPISLIKQDGVLCTLRSSLDDTGTGKVSIVLQANRDIQSARLICAGYSINLSKAEDGKL
CCHHHHHHCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEECEEECCCCCCCHH
LGELIIPGVEIWWPHTHGRPALHEVVLELDGNQHRLGRTGFRQVEIDHGEDGNGFGLKVN
HHHHHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEC
GQPVFCRGAVWTTADIVRLPGTRPDYEPWLKKAAEAGMNMIRVGGTMAYETPEFFALCDE
CCEEEEECCEECCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCEEEECCCHHHHHHHH
LGIMVWQDAMLANFDYPAKDDGLRQHIVMEIEQLLESTALSPSFAIFCGGSEMYQQGAML
HCCEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCC
GLPEQIWKGTLTEEILPELVAEKRPDAAYVANSPSGGALPFFPNAGVGHYYGVGAYCRPL
CCCHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCH
EDARRADLRFAAECLAFANIPEQETLDRYLPGVAVHDPRWKARTPRDRGASWDFEDVRDH
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHH
YLKLLYEAEPDVLRREDGALYLDMSRAATAEVMEATFAEWRRSGSSCQGALVWTLQDLVP
HHHHHHCCCCCHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHCC
GAGWGIIDAAGRPKSVWHALKRAFRPVQVSLSDEGTNGLDIHILNDTGDSLNTMLELTCL
CCCCCEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHH
REGLQPVVHAKRPLALLPRESQTIAATDLFGAFFDTTYAYRFGPPSHDVTIARLRDIATG
HHHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHHCCEEEEECCCCCCEEHHHHHHHHCC
HVIADAFHFPLGRKKALHAANLQVAISETNGHWSLEIGTDRLAQSVHITAEGYRACESWF
HHHHHHHHCCCCCCHHEEECCEEEEEEECCCEEEEEECHHHHHCEEEEEHHHHHHHHHHH
HLGPGEARKIGLLPETATTEAPPSGEVVSLGSSRRFSF
CCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA