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The map label for this gene is dapA [H]

Identifier: 15889768

GI number: 15889768

Start: 2471384

End: 2472268

Strand: Direct

Name: dapA [H]

Synonym: Atu2503

Alternate gene names: 15889768

Gene position: 2471384-2472268 (Clockwise)

Preceding gene: 15889760

Following gene: 159185245

Centisome position: 86.97

GC content: 60.9

Gene sequence:

>885_bases
TTGACCCAGAAATTTGGCCTTTCGGCAGCCCTGACGACCCCTTTCAAAACGGACGGAACGGTCGACATCGATGCCATGAT
CGCCCATGCGCGCCGCTGTTTGTCCAACGGCTGCGACAGCGTGACACTCTTCGGCACGACAGGTGAAGGCTGCTCCGTCG
GCAGCCGCGAACGGCAGGCGATCCTCTCCAGCTTCATTGCAGCAGGCATTGCGCCGTCGCGCATCGTCACCGGTGTTCTG
GTGGATTCCATCGAGGATGCGGCAGACCAGTCGGCCGAAGCCCTGAATGCCGGCGCGCGGAATATTCTGCTCGCCCCGCC
CTCCTATTTCAAGAACGTCAGCGATGACGGCCTGTTTGCCTGGTTCTCGGCTGTCTTTTCAAAGATCGGCAAGGATGCGC
GCGACATTCTCGTCTACAACATCCCCTCCGTGACCATGGTAACACTGTCCGTCGAGCTGGTGGGACGGCTGAAGGCCGCA
TTTCCGGGCATCGTCACCGGCGTCAAGGATTCCTCCGGCAACTGGAGCCATACCGAGCGTCTCCTCAAGGAACACGGTGA
CCTTGCCATCCTTATCGGCGACGAGCGTGATCTCGCCAGGGGCGTTCGCCTCGGTGGCCAGGGTGCCATCTCCGGCGTTG
CCAATTTCCTGACGCAGGAAGTGCGCGCCATGGCCGTCGATGGCAAGGACGATCCGCGCATCGTCGATCTTGTTGTGGAA
CTTCTGAAATTCCCGGTTACGCCTGCCGTCAAGGTGCTGGTATCACACACGACAGGGGAAACTATCTGGTCGGATGTGCG
TGCACCACTCGTCGCCATTTCACCGGAAGACCGCCGGCAGATCGAAGGCGCATTCGACGCGCTGTTTCGCAGGCAGGCCG
CCTGA

Upstream 100 bases:

>100_bases
CTTCACGCTCATGCTCCGAACAATCATATTGCAATTAGCTCTTTACAACTAACATGTCAGTATGCCATCAATCCGTTGTC
ACCTTGGAGGAGCATCTTAA

Downstream 100 bases:

>100_bases
ACAAAGCTGAAAGGTTGAGCATGGACGATACCGGCGAACAGACATTGCGGGAACGGGCGTATGAGAGCTTTACGCATCAC
CTTCTCTCGCGTGACGTTCG

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTQKFGLSAALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL
VDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAA
FPGIVTGVKDSSGNWSHTERLLKEHGDLAILIGDERDLARGVRLGGQGAISGVANFLTQEVRAMAVDGKDDPRIVDLVVE
LLKFPVTPAVKVLVSHTTGETIWSDVRAPLVAISPEDRRQIEGAFDALFRRQAA

Sequences:

>Translated_294_residues
MTQKFGLSAALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL
VDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAA
FPGIVTGVKDSSGNWSHTERLLKEHGDLAILIGDERDLARGVRLGGQGAISGVANFLTQEVRAMAVDGKDDPRIVDLVVE
LLKFPVTPAVKVLVSHTTGETIWSDVRAPLVAISPEDRRQIEGAFDALFRRQAA
>Mature_293_residues
TQKFGLSAALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLV
DSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAF
PGIVTGVKDSSGNWSHTERLLKEHGDLAILIGDERDLARGVRLGGQGAISGVANFLTQEVRAMAVDGKDDPRIVDLVVEL
LKFPVTPAVKVLVSHTTGETIWSDVRAPLVAISPEDRRQIEGAFDALFRRQAA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1786463, Length=218, Percent_Identity=27.5229357798165, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI87082415, Length=219, Percent_Identity=26.4840182648402, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789620, Length=212, Percent_Identity=24.5283018867925, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788823, Length=293, Percent_Identity=26.6211604095563, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 31255; Mature: 31124

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKFGLSAALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQA
CCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH
ILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCHHHH
WFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGIVTGVKDSSGNWSHTER
HHHHHHHHHCCCCHHEEEEECCCEEEEEEHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHH
LLKEHGDLAILIGDERDLARGVRLGGQGAISGVANFLTQEVRAMAVDGKDDPRIVDLVVE
HHHHCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LLKFPVTPAVKVLVSHTTGETIWSDVRAPLVAISPEDRRQIEGAFDALFRRQAA
HHHCCCCHHHHHHHHCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQKFGLSAALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQA
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH
ILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCHHHH
WFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGIVTGVKDSSGNWSHTER
HHHHHHHHHCCCCHHEEEEECCCEEEEEEHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHH
LLKEHGDLAILIGDERDLARGVRLGGQGAISGVANFLTQEVRAMAVDGKDDPRIVDLVVE
HHHHCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
LLKFPVTPAVKVLVSHTTGETIWSDVRAPLVAISPEDRRQIEGAFDALFRRQAA
HHHCCCCHHHHHHHHCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA