Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is mexE [H]
Identifier: 15889750
GI number: 15889750
Start: 2448618
End: 2449808
Strand: Direct
Name: mexE [H]
Synonym: Atu2482
Alternate gene names: 15889750
Gene position: 2448618-2449808 (Clockwise)
Preceding gene: 159185233
Following gene: 15889751
Centisome position: 86.17
GC content: 64.48
Gene sequence:
>1191_bases ATGACGCTGAACACAAAGCGCCGGGCCCTGACGGGTGCCGGCATCGGGCTTGCCATGTCCGTTGCAGCAGGAGCACTGTT TTTCGACCTCCCCACCAGCCGCAATGCGACGGCCGCGTCCACGCCCGCCGAAACGCCGGCAATCCCGGTCACCGTCGCCA AGGTGGAGAGCCGCGACGTGATGCGCTGGGAAGAATTTTCCGGCCGTCTGGAGGCCGTTGACCGCGTGCAGATCCGCTCC CGCGTCGCCGGCCAGATCAAGGCCGTACATTTCCGCGAAGGCGCGCTGGTGAAGGAAGGTGACCCGCTCTTCACCATCGA CCCGGCCCCCTATCAGGCCGCAGTCGCGGGCGCTGAAGGACAGGTCGCTTCCGCCGAAGCCAAGGTCAGCCTTGCAAAGA CGGAACTCGACCGTGGCCGCAGGCTTTCCGATAACCGTACCATCTCCCAGAGTGATCTCGACCAGCGTCAAAGCTCGTTT GCGGATGCCGAAGCCCAGCTTCGCGCCGCCCGCGCAGCATTGACCACCGCCCAGCTTGATCTCGGTTACACCGAAATCAT CGCGCCGGTTTCCGGCAGGGTCGGCAGGATCGAAATCACCGCCGGCAATCTCGTCGCTGCGGGCTCCACCTCGCCGGCAC TGACCACGCTCGTCTCGGTCAACCCGATCTATGCAAGCTTCAACGCCAGCGAAGGCGTCGTGGCCAAGGCTCTTGCCGAG CTGCCGAAGACCGATGGCGCCCTGCCCGCTCTGGAACAGATCCCGGTGGAAATCGGCACGCTTTCGGATGAAGGCACGCC GATCAAGGGCACGCTGCACCTGATCGACAACCAGGTGGATTCGGCAAGCGGCACCATCGGTGTGCGCGCCATCTTCGACA ATCCGGATGGCAGGCTGATCCCCGGCCAGTTCGTGCGGGTACGCATGGGCGAACCGAAGCCGGAAAACCGCATCGTCATC AGCGACCGCGCCATCGGCACGGATCAGGACAAGCGCTTCGTCTTCGTGGTCGATGCCGAAAACAAGGTAAGCTACCGCCA GATCAAGCCCGGCGCACCGGCTGATGGCCAGCGCATCATCGACAGCGGCCTTGCCGCCGGTGATACGATCGTCGTCAACG GCCTGCAGCGCATCCGTCCCGGTGCGACCATCGCGCCCCAGGCGGAAGACAAGGTTGCTGCTTCGCAGTAA
Upstream 100 bases:
>100_bases TCTGTTCGGAGTTCAAGACCTTCGTTGACCAATTGAAACACTGAATACCGCATTTATTGAGAAACTGATCGGCTCCTGAT CTGGGGCCAAGGAGATACCC
Downstream 100 bases:
>100_bases CCCACCTCTTTGATCAGTAAGCGTCCCGCAGTATCGCGAGACGCGCATTCACACAGAACCGGCCTTCACCGGCGGCAGGA TTGCCGCCGGAACAGCCTTC
Product: HlyD family secretion protein
Products: NA
Alternate protein names: Multidrug transporter mdtA [H]
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MTLNTKRRALTGAGIGLAMSVAAGALFFDLPTSRNATAASTPAETPAIPVTVAKVESRDVMRWEEFSGRLEAVDRVQIRS RVAGQIKAVHFREGALVKEGDPLFTIDPAPYQAAVAGAEGQVASAEAKVSLAKTELDRGRRLSDNRTISQSDLDQRQSSF ADAEAQLRAARAALTTAQLDLGYTEIIAPVSGRVGRIEITAGNLVAAGSTSPALTTLVSVNPIYASFNASEGVVAKALAE LPKTDGALPALEQIPVEIGTLSDEGTPIKGTLHLIDNQVDSASGTIGVRAIFDNPDGRLIPGQFVRVRMGEPKPENRIVI SDRAIGTDQDKRFVFVVDAENKVSYRQIKPGAPADGQRIIDSGLAAGDTIVVNGLQRIRPGATIAPQAEDKVAASQ
Sequences:
>Translated_396_residues MTLNTKRRALTGAGIGLAMSVAAGALFFDLPTSRNATAASTPAETPAIPVTVAKVESRDVMRWEEFSGRLEAVDRVQIRS RVAGQIKAVHFREGALVKEGDPLFTIDPAPYQAAVAGAEGQVASAEAKVSLAKTELDRGRRLSDNRTISQSDLDQRQSSF ADAEAQLRAARAALTTAQLDLGYTEIIAPVSGRVGRIEITAGNLVAAGSTSPALTTLVSVNPIYASFNASEGVVAKALAE LPKTDGALPALEQIPVEIGTLSDEGTPIKGTLHLIDNQVDSASGTIGVRAIFDNPDGRLIPGQFVRVRMGEPKPENRIVI SDRAIGTDQDKRFVFVVDAENKVSYRQIKPGAPADGQRIIDSGLAAGDTIVVNGLQRIRPGATIAPQAEDKVAASQ >Mature_395_residues TLNTKRRALTGAGIGLAMSVAAGALFFDLPTSRNATAASTPAETPAIPVTVAKVESRDVMRWEEFSGRLEAVDRVQIRSR VAGQIKAVHFREGALVKEGDPLFTIDPAPYQAAVAGAEGQVASAEAKVSLAKTELDRGRRLSDNRTISQSDLDQRQSSFA DAEAQLRAARAALTTAQLDLGYTEIIAPVSGRVGRIEITAGNLVAAGSTSPALTTLVSVNPIYASFNASEGVVAKALAEL PKTDGALPALEQIPVEIGTLSDEGTPIKGTLHLIDNQVDSASGTIGVRAIFDNPDGRLIPGQFVRVRMGEPKPENRIVIS DRAIGTDQDKRFVFVVDAENKVSYRQIKPGAPADGQRIIDSGLAAGDTIVVNGLQRIRPGATIAPQAEDKVAASQ
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI87082036, Length=339, Percent_Identity=34.5132743362832, Blast_Score=196, Evalue=1e-51, Organism=Escherichia coli, GI1789929, Length=358, Percent_Identity=31.2849162011173, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1786668, Length=347, Percent_Identity=34.2939481268012, Blast_Score=165, Evalue=4e-42, Organism=Escherichia coli, GI1789665, Length=337, Percent_Identity=32.6409495548961, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI87081796, Length=333, Percent_Identity=26.4264264264264, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI87081951, Length=237, Percent_Identity=30.8016877637131, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789637, Length=212, Percent_Identity=30.6603773584906, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022824 - InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 41678; Mature: 41546
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNTKRRALTGAGIGLAMSVAAGALFFDLPTSRNATAASTPAETPAIPVTVAKVESRDV CCCCCCHHEEECCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCC MRWEEFSGRLEAVDRVQIRSRVAGQIKAVHFREGALVKEGDPLFTIDPAPYQAAVAGAEG HHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEECCCEEECCCCEEEECCCCCEEEEECCCC QVASAEAKVSLAKTELDRGRRLSDNRTISQSDLDQRQSSFADAEAQLRAARAALTTAQLD CEECCHHEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEC LGYTEIIAPVSGRVGRIEITAGNLVAAGSTSPALTTLVSVNPIYASFNASEGVVAKALAE CCHHHEECCCCCCEEEEEEEECCEEEECCCCCCEEEEEECCCEEEECCCCCCHHHHHHHH LPKTDGALPALEQIPVEIGTLSDEGTPIKGTLHLIDNQVDSASGTIGVRAIFDNPDGRLI CCCCCCCCCHHHHCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCC PGQFVRVRMGEPKPENRIVISDRAIGTDQDKRFVFVVDAENKVSYRQIKPGAPADGQRII CCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHH DSGLAAGDTIVVNGLQRIRPGATIAPQAEDKVAASQ HCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLNTKRRALTGAGIGLAMSVAAGALFFDLPTSRNATAASTPAETPAIPVTVAKVESRDV CCCCCHHEEECCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCC MRWEEFSGRLEAVDRVQIRSRVAGQIKAVHFREGALVKEGDPLFTIDPAPYQAAVAGAEG HHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEECCCEEECCCCEEEECCCCCEEEEECCCC QVASAEAKVSLAKTELDRGRRLSDNRTISQSDLDQRQSSFADAEAQLRAARAALTTAQLD CEECCHHEEEEHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEC LGYTEIIAPVSGRVGRIEITAGNLVAAGSTSPALTTLVSVNPIYASFNASEGVVAKALAE CCHHHEECCCCCCEEEEEEEECCEEEECCCCCCEEEEEECCCEEEECCCCCCHHHHHHHH LPKTDGALPALEQIPVEIGTLSDEGTPIKGTLHLIDNQVDSASGTIGVRAIFDNPDGRLI CCCCCCCCCHHHHCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCC PGQFVRVRMGEPKPENRIVISDRAIGTDQDKRFVFVVDAENKVSYRQIKPGAPADGQRII CCEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHH DSGLAAGDTIVVNGLQRIRPGATIAPQAEDKVAASQ HCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA