Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889741
Identifier: 15889741
GI number: 15889741
Start: 2439351
End: 2440868
Strand: Direct
Name: 15889741
Synonym: Atu2471
Alternate gene names: NA
Gene position: 2439351-2440868 (Clockwise)
Preceding gene: 15889740
Following gene: 159185230
Centisome position: 85.84
GC content: 64.36
Gene sequence:
>1518_bases ATGAGTACCTTTGAATTCCTGCTGCACGGTCTTGAGGTTGCCGCCCAACCCATGAACCTGCTCTACGCGCTGATCGGCGT GACACTCGGCACCGCCGTCGGCGTTCTGCCCGGCATCGGCCCGGCGCTGACCGTGGCGCTGCTTCTGCCCGTCACCTACA GGCTCGATCCCGCCGGTTCGCTCATCATGTTCGCCGGCATCTATTATGGCGGCATGTATGGCGGCTCGACCACGTCGATC CTGCTCAACACGCCAGGCGAAAGCGCCTCGATCGTCACGGCACTCGAAGGCAACAAGATGGCCCGCAAGGGCAGAGGCGG ACCGGCATTGGCCACCGCCGCCATCGGCTCCTTCGTCGCCGGCCTCATCGCCACGATCGCCCTTGCCTTTGTCGCCCCTT ACATCGTCAAGCTGGCGCTGGTGTTCGGCCCGCGCGAATATTTCGCGTTGATGGTGCTCGCCTTCGTCACCGTTTCTTCC GCCTTCGGGGATTCGGCGCTGCGCGGTCTCACCTCGCTGTTCATCGGCTTTGCGCTTGCCATCGTCGGCATCGACCAGCT GACCGGGCAGACCCGCATGAGCTTCGGCATTCCCGACCTGCTCGACGGCGTCGAAGTGACGACGCTTGCAGTCGCCATGT TCGCCATCGGCGAAACGCTGTTCATCGTCGCACAGGGCAATAGCGGCGACGAAAAGGTCGAGGCCGTCAAAGGCTCGGTC TGGATGAGCGCGCAGGACTGGGCGCGCTCCTGGAAGCCTTGGCTGCGCGGCACGTTGATCGGTTTCCCCATCGGCGCGAT GCCGGCGGGCGGTGCTGAAATCGGCACCTTCCTCTCCTATGCGACCGAAAAGAAACTGACCAAATATCCGGAAGAATTCG GTCACGGCGCCATCGAAGGCGTCGCCGGCCCCGAAGCCGCCAACAATGCCTCCGCCGCCGGTACGCTCGTGCCGCTGTTG ACGCTCGGCCTGCCGACGACGGCGACCGCCGCCATCATGCTCGCGGGTTTCCAGCAGTTCGGCCTGCAACCGGGTCCCCT GCTGTTCGCCACCAATCCGCAGCTCGTCTGGGGCCTGATCGCCAGCCTGTTCATCGCCAATCTGATGCTGCTGGTGCTCA ACTTGCCGCTCGTCGGCCTGTGGGTGAAGCTGCTGACCATTCCGAAACCCTGGCTTTATGCCGGCATCCTGCTGTTCGCC ACCCTCGGCACCATCGGCGCCAACCCGTCGGTGTTCGAACTCGGCATGCTGCTCGCCTTCGGTATCCTCGGCTATATCAT GCGCATCTTCGGTTATCCGATTGCGCCTGCGGTCGTTGGCCTCATCCTCGGTCCGCTTGCCGAACAGCAGCTTCGCCGTG CCCTTGCCATCGGCCAGGGTGACCCGACCGTGTTGCTCACTTCGCCGATCGCCGTCGGCCTGTTCATCGTGGCGGCTGCC GCCTTCATCGTCCCGCTGATCATGCGTATCCGCGGCCGCGGCGAGGTGCTGTCGCAGCTTGCCGCCAACGAGGACTGA
Upstream 100 bases:
>100_bases TTCCAGCCACTATTCGAGATCACAGGAACCGCCGGCGCGCGATGACGCATATGCCAGCCGTTCCGCCCGCCCTTCTGCTC GACTTGGGGGACATCTGCCC
Downstream 100 bases:
>100_bases GAAACCGGAAACCTCCCAAGGCAACTGGCCCCGTATCTCCGGATACGGGGCCTTTTTTTGTTCACGCCAACGGGATGTGA AGCGCGGGCGCGACCGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MSTFEFLLHGLEVAAQPMNLLYALIGVTLGTAVGVLPGIGPALTVALLLPVTYRLDPAGSLIMFAGIYYGGMYGGSTTSI LLNTPGESASIVTALEGNKMARKGRGGPALATAAIGSFVAGLIATIALAFVAPYIVKLALVFGPREYFALMVLAFVTVSS AFGDSALRGLTSLFIGFALAIVGIDQLTGQTRMSFGIPDLLDGVEVTTLAVAMFAIGETLFIVAQGNSGDEKVEAVKGSV WMSAQDWARSWKPWLRGTLIGFPIGAMPAGGAEIGTFLSYATEKKLTKYPEEFGHGAIEGVAGPEAANNASAAGTLVPLL TLGLPTTATAAIMLAGFQQFGLQPGPLLFATNPQLVWGLIASLFIANLMLLVLNLPLVGLWVKLLTIPKPWLYAGILLFA TLGTIGANPSVFELGMLLAFGILGYIMRIFGYPIAPAVVGLILGPLAEQQLRRALAIGQGDPTVLLTSPIAVGLFIVAAA AFIVPLIMRIRGRGEVLSQLAANED
Sequences:
>Translated_505_residues MSTFEFLLHGLEVAAQPMNLLYALIGVTLGTAVGVLPGIGPALTVALLLPVTYRLDPAGSLIMFAGIYYGGMYGGSTTSI LLNTPGESASIVTALEGNKMARKGRGGPALATAAIGSFVAGLIATIALAFVAPYIVKLALVFGPREYFALMVLAFVTVSS AFGDSALRGLTSLFIGFALAIVGIDQLTGQTRMSFGIPDLLDGVEVTTLAVAMFAIGETLFIVAQGNSGDEKVEAVKGSV WMSAQDWARSWKPWLRGTLIGFPIGAMPAGGAEIGTFLSYATEKKLTKYPEEFGHGAIEGVAGPEAANNASAAGTLVPLL TLGLPTTATAAIMLAGFQQFGLQPGPLLFATNPQLVWGLIASLFIANLMLLVLNLPLVGLWVKLLTIPKPWLYAGILLFA TLGTIGANPSVFELGMLLAFGILGYIMRIFGYPIAPAVVGLILGPLAEQQLRRALAIGQGDPTVLLTSPIAVGLFIVAAA AFIVPLIMRIRGRGEVLSQLAANED >Mature_504_residues STFEFLLHGLEVAAQPMNLLYALIGVTLGTAVGVLPGIGPALTVALLLPVTYRLDPAGSLIMFAGIYYGGMYGGSTTSIL LNTPGESASIVTALEGNKMARKGRGGPALATAAIGSFVAGLIATIALAFVAPYIVKLALVFGPREYFALMVLAFVTVSSA FGDSALRGLTSLFIGFALAIVGIDQLTGQTRMSFGIPDLLDGVEVTTLAVAMFAIGETLFIVAQGNSGDEKVEAVKGSVW MSAQDWARSWKPWLRGTLIGFPIGAMPAGGAEIGTFLSYATEKKLTKYPEEFGHGAIEGVAGPEAANNASAAGTLVPLLT LGLPTTATAAIMLAGFQQFGLQPGPLLFATNPQLVWGLIASLFIANLMLLVLNLPLVGLWVKLLTIPKPWLYAGILLFAT LGTIGANPSVFELGMLLAFGILGYIMRIFGYPIAPAVVGLILGPLAEQQLRRALAIGQGDPTVLLTSPIAVGLFIVAAAA FIVPLIMRIRGRGEVLSQLAANED
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52508; Mature: 52377
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFEFLLHGLEVAAQPMNLLYALIGVTLGTAVGVLPGIGPALTVALLLPVTYRLDPAGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCC LIMFAGIYYGGMYGGSTTSILLNTPGESASIVTALEGNKMARKGRGGPALATAAIGSFVA HHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHH GLIATIALAFVAPYIVKLALVFGPREYFALMVLAFVTVSSAFGDSALRGLTSLFIGFALA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IVGIDQLTGQTRMSFGIPDLLDGVEVTTLAVAMFAIGETLFIVAQGNSGDEKVEAVKGSV HHHHHHHCCCCHHCCCCHHHHCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCC WMSAQDWARSWKPWLRGTLIGFPIGAMPAGGAEIGTFLSYATEKKLTKYPEEFGHGAIEG EECHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCC VAGPEAANNASAAGTLVPLLTLGLPTTATAAIMLAGFQQFGLQPGPLLFATNPQLVWGLI CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHH ASLFIANLMLLVLNLPLVGLWVKLLTIPKPWLYAGILLFATLGTIGANPSVFELGMLLAF HHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GILGYIMRIFGYPIAPAVVGLILGPLAEQQLRRALAIGQGDPTVLLTSPIAVGLFIVAAA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHH AFIVPLIMRIRGRGEVLSQLAANED HHHHHHHHHHCCCHHHHHHHHCCCC >Mature Secondary Structure STFEFLLHGLEVAAQPMNLLYALIGVTLGTAVGVLPGIGPALTVALLLPVTYRLDPAGS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCCCC LIMFAGIYYGGMYGGSTTSILLNTPGESASIVTALEGNKMARKGRGGPALATAAIGSFVA HHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHCCCCCCHHHHHHHHHHHH GLIATIALAFVAPYIVKLALVFGPREYFALMVLAFVTVSSAFGDSALRGLTSLFIGFALA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IVGIDQLTGQTRMSFGIPDLLDGVEVTTLAVAMFAIGETLFIVAQGNSGDEKVEAVKGSV HHHHHHHCCCCHHCCCCHHHHCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCC WMSAQDWARSWKPWLRGTLIGFPIGAMPAGGAEIGTFLSYATEKKLTKYPEEFGHGAIEG EECHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCC VAGPEAANNASAAGTLVPLLTLGLPTTATAAIMLAGFQQFGLQPGPLLFATNPQLVWGLI CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHH ASLFIANLMLLVLNLPLVGLWVKLLTIPKPWLYAGILLFATLGTIGANPSVFELGMLLAF HHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH GILGYIMRIFGYPIAPAVVGLILGPLAEQQLRRALAIGQGDPTVLLTSPIAVGLFIVAAA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHH AFIVPLIMRIRGRGEVLSQLAANED HHHHHHHHHHCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]