Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is exoM [H]
Identifier: 15889646
GI number: 15889646
Start: 2346644
End: 2347588
Strand: Direct
Name: exoM [H]
Synonym: Atu2373
Alternate gene names: 15889646
Gene position: 2346644-2347588 (Clockwise)
Preceding gene: 159185178
Following gene: 159185183
Centisome position: 82.58
GC content: 62.01
Gene sequence:
>945_bases ATGCCCGAGATCATGCCGGAAGCGGTGGTGTGCATTCCGAGTTTCCGCCGGCCGGAAGGCCTGCAAAAGACGCTTGCATC GCTCGCAGCCCAGAAGGTCGATTTTCCCTTCGCCGTCGTCGTGGTCGATAATGACGGCGCAGGCCAGCAGGGCCTCGCCG TTGCGCGCGCATTTTTCGCACAAAACGGCATGGCCGGTCAGGCACTGGTGGAGCCGACGCAGGGCAATTGTTACGCCATC AACACGGCATTTCGCACAGCGCGACAGACTTATCCTTCGGCTGAGTGGTTCCTGATGATCGATGACGACGAGGCCGCCTC CCCCGTATGGCTTGGCGAAATGGTGTCGGCAGCAAAATCCTTCGGCGTCGATATCGTCGGCGGACCTGTCAACCGCGAAT TCGACGCACCGGCTTCGAAGGCGGTCCTGTCGCATCCGCTGTTCGGCTCCATCGAAGCACCGACCGGCCTTGTCGAGCAA ATCCACGGATCGGGCAATTGCCTGATCTCGCGACGGGTGTTCGAAAGCCTGCCGAAACCGGAATTCGACGTGCAGTTCAA CTTCCTCGGCGGCGGCGACATGGATTTCTTCACCCGCTGCCGCAAGGCTGGCTTTAAGTTTGCCTGGAATGCGCGCGCCG TCATCATCGAATATGTGCCGGAAAGCCGCATGGCACCGCGCTGGATCATGGAGCGCTCGCTCCGCACCGGCATCATCAAT TACAGCATCGACCGCGCCCGCCGCCCCGGCCTGAAGGGTGGGCTGCTGCTCGCGGCCAAAAATGCCGTTAGCCTGTGCCT GTCTCTGGTGCGCGCCGTTTCCGCCGGGCTGAAAACCGGCGCACTGCTGCCCGCCACACATTCGCCGCTGATGTCCATCG GCCGGGTGATGGCAAGCCTCGGCATTACACTCACGCCCTACAAGGCGCCAGCAAAGAAGACCTGA
Upstream 100 bases:
>100_bases CTTTTTCGGCGCTTGCCGATACCATCCTCAACCGCCCGCGCCAGAGCCTCAGGGCCGTGGTCTTTTCCGCCGCCGCACTA GCCGGAATTTAGGAGTTTCC
Downstream 100 bases:
>100_bases ACCCCGATCGTTCGCCCCGCTGGTTTAGCTGAGGGTCTTTTCCCTGCCGAATGACAACATGTTCAGGCGTCGTTTCTGCA AGCCGAACGACGAAAAAGCC
Product: UDP-hexose transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPEIMPEAVVCIPSFRRPEGLQKTLASLAAQKVDFPFAVVVVDNDGAGQQGLAVARAFFAQNGMAGQALVEPTQGNCYAI NTAFRTARQTYPSAEWFLMIDDDEAASPVWLGEMVSAAKSFGVDIVGGPVNREFDAPASKAVLSHPLFGSIEAPTGLVEQ IHGSGNCLISRRVFESLPKPEFDVQFNFLGGGDMDFFTRCRKAGFKFAWNARAVIIEYVPESRMAPRWIMERSLRTGIIN YSIDRARRPGLKGGLLLAAKNAVSLCLSLVRAVSAGLKTGALLPATHSPLMSIGRVMASLGITLTPYKAPAKKT
Sequences:
>Translated_314_residues MPEIMPEAVVCIPSFRRPEGLQKTLASLAAQKVDFPFAVVVVDNDGAGQQGLAVARAFFAQNGMAGQALVEPTQGNCYAI NTAFRTARQTYPSAEWFLMIDDDEAASPVWLGEMVSAAKSFGVDIVGGPVNREFDAPASKAVLSHPLFGSIEAPTGLVEQ IHGSGNCLISRRVFESLPKPEFDVQFNFLGGGDMDFFTRCRKAGFKFAWNARAVIIEYVPESRMAPRWIMERSLRTGIIN YSIDRARRPGLKGGLLLAAKNAVSLCLSLVRAVSAGLKTGALLPATHSPLMSIGRVMASLGITLTPYKAPAKKT >Mature_313_residues PEIMPEAVVCIPSFRRPEGLQKTLASLAAQKVDFPFAVVVVDNDGAGQQGLAVARAFFAQNGMAGQALVEPTQGNCYAIN TAFRTARQTYPSAEWFLMIDDDEAASPVWLGEMVSAAKSFGVDIVGGPVNREFDAPASKAVLSHPLFGSIEAPTGLVEQI HGSGNCLISRRVFESLPKPEFDVQFNFLGGGDMDFFTRCRKAGFKFAWNARAVIIEYVPESRMAPRWIMERSLRTGIINY SIDRARRPGLKGGLLLAAKNAVSLCLSLVRAVSAGLKTGALLPATHSPLMSIGRVMASLGITLTPYKAPAKKT
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fourth sugar (glucose), catalyzes the formation of a beta-1,4 linkage between the third acetylated sugar and the fourth sugar [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 33809; Mature: 33677
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEIMPEAVVCIPSFRRPEGLQKTLASLAAQKVDFPFAVVVVDNDGAGQQGLAVARAFFA CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH QNGMAGQALVEPTQGNCYAINTAFRTARQTYPSAEWFLMIDDDEAASPVWLGEMVSAAKS CCCCCCCEEECCCCCCEEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH FGVDIVGGPVNREFDAPASKAVLSHPLFGSIEAPTGLVEQIHGSGNCLISRRVFESLPKP CCCEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEHHHHHHCCCC EFDVQFNFLGGGDMDFFTRCRKAGFKFAWNARAVIIEYVPESRMAPRWIMERSLRTGIIN CCEEEEEEECCCCHHHHHHHHHCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHEE YSIDRARRPGLKGGLLLAAKNAVSLCLSLVRAVSAGLKTGALLPATHSPLMSIGRVMASL EEHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC GITLTPYKAPAKKT CCEECCCCCCCCCC >Mature Secondary Structure PEIMPEAVVCIPSFRRPEGLQKTLASLAAQKVDFPFAVVVVDNDGAGQQGLAVARAFFA CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHH QNGMAGQALVEPTQGNCYAINTAFRTARQTYPSAEWFLMIDDDEAASPVWLGEMVSAAKS CCCCCCCEEECCCCCCEEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH FGVDIVGGPVNREFDAPASKAVLSHPLFGSIEAPTGLVEQIHGSGNCLISRRVFESLPKP CCCEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEEHHHHHHCCCC EFDVQFNFLGGGDMDFFTRCRKAGFKFAWNARAVIIEYVPESRMAPRWIMERSLRTGIIN CCEEEEEEECCCCHHHHHHHHHCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHEE YSIDRARRPGLKGGLLLAAKNAVSLCLSLVRAVSAGLKTGALLPATHSPLMSIGRVMASL EEHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHC GITLTPYKAPAKKT CCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]