Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yitG [H]
Identifier: 15889635
GI number: 15889635
Start: 2336174
End: 2337376
Strand: Reverse
Name: yitG [H]
Synonym: Atu2361
Alternate gene names: 15889635
Gene position: 2337376-2336174 (Counterclockwise)
Preceding gene: 159185173
Following gene: 159185172
Centisome position: 82.26
GC content: 64.09
Gene sequence:
>1203_bases ATGACCGAGAATTCCCCGGCGCTGAAGCTGACGCTGCTGTTCGTCGCCACGCTCACCATCATGGCCGGAACCACGGTCGC GCCCTCGTTGCCCGCCATAGAACAGAGCTTCCTGTCGACGCCTGATGTAGAGATCATGAGCCGCATGGTGCTGACATTGC CGTCGGTGTTCGTGGCGCTCTGCGCGCCCATCGCCGGCGTGCTGGCGGACCGTTTTGGCCGCAAGCGGCTGCTGCTCGGC GCGATCCTGCTTTACAGCCTGTCCGGCATATCCGGCCTTTTTGCCGACAGTCTGGCTGGCCTGCTCGTCGGCCGCGCCTT TCTGGGTCTGGCGATCGGTGGCATCATGACTATCGGCACGGCGCTGGTGGGCGATTATTTCGAGGGGCCGGCGCGGGAGC GTTATCTTGGCCTTCAACAGGCCTTCACCCAGCTGGGTGGCGTCGTTTTCGTGGTGGCGGGTGGATGGCTCGCGGATATC CACTGGCGCGCGCCTTTTGCTGTTTATGCCGTGGCGTTGCTCATCCTGCCGGCGGCCCTGTTTTTCCTGAGGGAACCGGC AAGGAACAGCAGCCGCGCCACGCAGAATGGCGAGCAGGGCCTTGCGGTCAACTGGTTGCCGGTGGCCGTGCTGGCCATGG CGGTGTTTCTCGTCAACGCCTTGTTTTACACCATCCCCTCGCAATTGCCGTTCTTCCTGCGCGAGTTCGGGGTGCTTTCC GGAAGCGTTGCAGGCTATGCCATCGGCATCTTCAATCTGGCAGGCGCGCTGATGGCGCTCAGCTTCGGGCGGTTGCGTGC CAGGATTGGCGTGACCGTCATTCTGGCGGCTGGACTGGTGCTGATGGCCACGGGCTTTGCGCTGCTTGCCACGGCAGGCG GTCTGTCCTCCATGCTGTCGGCGCTGGCCGTGGTGGGGGCTGGCCTTGGCGCCGTGATGCCGTCCATCATGTCCACGACG ATCATGCTTGCGCCGCTACGGTTGCGCGGGCGTATCGCCGGCATCGTCACGGCATCGATGTTTCTCGGGCATTTCATATC GCCGCTCGTAAGCCAGCCCTGGATCGCCAGGTTCGGTTTTGCCACGACCTATCGCGATATCGCCTTGGTCTTCGCCGTCA TGGCCGGACTTGCCGCCATCGCCACGATCTTCCAGCGCCGCACCGGCATACGGAAAGCGCAGCCTCTCACGCGGGGCGGG TGA
Upstream 100 bases:
>100_bases GCGACAGGCTGAAAGGCCTGCCGCTTTTTTGTCCGCGGCTATTGACCTCAACTATGGTTGAGGAATTATCAAAGCATGGA ACACTATCGAAGGACGTTCC
Downstream 100 bases:
>100_bases GGCGCAGCGTGGGGTGGGGGCTGCCGCTGATACCGCCACAAACCGTTCGGGCTGGTGTTGAAGCACTCCGCCCAGCTTCT GCAGTTCTTCATGTCTCAGG
Product: MFS permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MTENSPALKLTLLFVATLTIMAGTTVAPSLPAIEQSFLSTPDVEIMSRMVLTLPSVFVALCAPIAGVLADRFGRKRLLLG AILLYSLSGISGLFADSLAGLLVGRAFLGLAIGGIMTIGTALVGDYFEGPARERYLGLQQAFTQLGGVVFVVAGGWLADI HWRAPFAVYAVALLILPAALFFLREPARNSSRATQNGEQGLAVNWLPVAVLAMAVFLVNALFYTIPSQLPFFLREFGVLS GSVAGYAIGIFNLAGALMALSFGRLRARIGVTVILAAGLVLMATGFALLATAGGLSSMLSALAVVGAGLGAVMPSIMSTT IMLAPLRLRGRIAGIVTASMFLGHFISPLVSQPWIARFGFATTYRDIALVFAVMAGLAAIATIFQRRTGIRKAQPLTRGG
Sequences:
>Translated_400_residues MTENSPALKLTLLFVATLTIMAGTTVAPSLPAIEQSFLSTPDVEIMSRMVLTLPSVFVALCAPIAGVLADRFGRKRLLLG AILLYSLSGISGLFADSLAGLLVGRAFLGLAIGGIMTIGTALVGDYFEGPARERYLGLQQAFTQLGGVVFVVAGGWLADI HWRAPFAVYAVALLILPAALFFLREPARNSSRATQNGEQGLAVNWLPVAVLAMAVFLVNALFYTIPSQLPFFLREFGVLS GSVAGYAIGIFNLAGALMALSFGRLRARIGVTVILAAGLVLMATGFALLATAGGLSSMLSALAVVGAGLGAVMPSIMSTT IMLAPLRLRGRIAGIVTASMFLGHFISPLVSQPWIARFGFATTYRDIALVFAVMAGLAAIATIFQRRTGIRKAQPLTRGG >Mature_399_residues TENSPALKLTLLFVATLTIMAGTTVAPSLPAIEQSFLSTPDVEIMSRMVLTLPSVFVALCAPIAGVLADRFGRKRLLLGA ILLYSLSGISGLFADSLAGLLVGRAFLGLAIGGIMTIGTALVGDYFEGPARERYLGLQQAFTQLGGVVFVVAGGWLADIH WRAPFAVYAVALLILPAALFFLREPARNSSRATQNGEQGLAVNWLPVAVLAMAVFLVNALFYTIPSQLPFFLREFGVLSG SVAGYAIGIFNLAGALMALSFGRLRARIGVTVILAAGLVLMATGFALLATAGGLSSMLSALAVVGAGLGAVMPSIMSTTI MLAPLRLRGRIAGIVTASMFLGHFISPLVSQPWIARFGFATTYRDIALVFAVMAGLAAIATIFQRRTGIRKAQPLTRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41882; Mature: 41750
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENSPALKLTLLFVATLTIMAGTTVAPSLPAIEQSFLSTPDVEIMSRMVLTLPSVFVAL CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH CAPIAGVLADRFGRKRLLLGAILLYSLSGISGLFADSLAGLLVGRAFLGLAIGGIMTIGT HHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVGDYFEGPARERYLGLQQAFTQLGGVVFVVAGGWLADIHWRAPFAVYAVALLILPAAL HHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHH FFLREPARNSSRATQNGEQGLAVNWLPVAVLAMAVFLVNALFYTIPSQLPFFLREFGVLS HHHHCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSVAGYAIGIFNLAGALMALSFGRLRARIGVTVILAAGLVLMATGFALLATAGGLSSMLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ALAVVGAGLGAVMPSIMSTTIMLAPLRLRGRIAGIVTASMFLGHFISPLVSQPWIARFGF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ATTYRDIALVFAVMAGLAAIATIFQRRTGIRKAQPLTRGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TENSPALKLTLLFVATLTIMAGTTVAPSLPAIEQSFLSTPDVEIMSRMVLTLPSVFVAL CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH CAPIAGVLADRFGRKRLLLGAILLYSLSGISGLFADSLAGLLVGRAFLGLAIGGIMTIGT HHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVGDYFEGPARERYLGLQQAFTQLGGVVFVVAGGWLADIHWRAPFAVYAVALLILPAAL HHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHH FFLREPARNSSRATQNGEQGLAVNWLPVAVLAMAVFLVNALFYTIPSQLPFFLREFGVLS HHHHCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSVAGYAIGIFNLAGALMALSFGRLRARIGVTVILAAGLVLMATGFALLATAGGLSSMLS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ALAVVGAGLGAVMPSIMSTTIMLAPLRLRGRIAGIVTASMFLGHFISPLVSQPWIARFGF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ATTYRDIALVFAVMAGLAAIATIFQRRTGIRKAQPLTRGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]