Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889612
Identifier: 15889612
GI number: 15889612
Start: 2313284
End: 2313679
Strand: Reverse
Name: 15889612
Synonym: Atu2335
Alternate gene names: NA
Gene position: 2313679-2313284 (Counterclockwise)
Preceding gene: 15889613
Following gene: 15889611
Centisome position: 81.42
GC content: 61.11
Gene sequence:
>396_bases ATGAACATGGCAATTCTAGACAATCTCTCCCGCTATCGCCCGCAGGCACTCGGGGCGCTGCGGATCATGACGGCGCTGCT TTTCATTTCGCACGGAACGCAGAAGCTGTTCGGTTTCCCGGCATCGCAGATGGACGGCTCCCTGCCGACGATGCTGCTGG TGGCGGCACTTCTGGAAGCCGTTGGCGGCCTTCTCGTGCTGGTCGGCCTGTTCACACGCCCGGTCGCCTTCATCCTGTCC GGCCAGATGGCTGTCGCTTATTTCATGGCGCACGGGCCGAAGAGCTTCTTCCCGGCCCTGAATGGTGGTGATGCTGCCAT CCTGTTCTGCTTCATCTTCCTGTATCTGGTGTTTGCCGGTGCGGGCGCTTTCTCGGTGGATGAACGCCGGGCCTGA
Upstream 100 bases:
>100_bases TTTCTGCTATATCGGAAATGTGATTTTCGGTGTTCGAGACGTGTATCCATAAAGGCATGATTGCGCTGTATCGAGCGTCG CACCACTTCAACGGGGACAC
Downstream 100 bases:
>100_bases TCGCCCGCCGTCATCACCGATCTTTATTGAGGCCCCGCATGGCTGGAACCATGCGGGGCCTCATTGTATTGATGCGGCGG AAACTTCGGTCTTCACCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MNMAILDNLSRYRPQALGALRIMTALLFISHGTQKLFGFPASQMDGSLPTMLLVAALLEAVGGLLVLVGLFTRPVAFILS GQMAVAYFMAHGPKSFFPALNGGDAAILFCFIFLYLVFAGAGAFSVDERRA
Sequences:
>Translated_131_residues MNMAILDNLSRYRPQALGALRIMTALLFISHGTQKLFGFPASQMDGSLPTMLLVAALLEAVGGLLVLVGLFTRPVAFILS GQMAVAYFMAHGPKSFFPALNGGDAAILFCFIFLYLVFAGAGAFSVDERRA >Mature_131_residues MNMAILDNLSRYRPQALGALRIMTALLFISHGTQKLFGFPASQMDGSLPTMLLVAALLEAVGGLLVLVGLFTRPVAFILS GQMAVAYFMAHGPKSFFPALNGGDAAILFCFIFLYLVFAGAGAFSVDERRA
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the doxX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011637 [H]
Pfam domain/function: PF07681 DoxX [H]
EC number: NA
Molecular weight: Translated: 14021; Mature: 14021
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMAILDNLSRYRPQALGALRIMTALLFISHGTQKLFGFPASQMDGSLPTMLLVAALLEA CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHCCCCCHHHHHHHHHHHH VGGLLVLVGLFTRPVAFILSGQMAVAYFMAHGPKSFFPALNGGDAAILFCFIFLYLVFAG HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHC AGAFSVDERRA CCCCCCCCCCC >Mature Secondary Structure MNMAILDNLSRYRPQALGALRIMTALLFISHGTQKLFGFPASQMDGSLPTMLLVAALLEA CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHCCCCCHHHHHHHHHHHH VGGLLVLVGLFTRPVAFILSGQMAVAYFMAHGPKSFFPALNGGDAAILFCFIFLYLVFAG HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHC AGAFSVDERRA CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]