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The map label for this gene is yfiH [C]

Identifier: 15889491

GI number: 15889491

Start: 2183329

End: 2184123

Strand: Direct

Name: yfiH [C]

Synonym: Atu2215

Alternate gene names: 15889491

Gene position: 2183329-2184123 (Clockwise)

Preceding gene: 15889490

Following gene: 15889492

Centisome position: 76.84

GC content: 62.39

Gene sequence:

>795_bases
ATGCAGAACGCAACGCTGCCGCTCCCGCTCCAGTCCCCCCTGCTCGCCGCGTCAGGTGAAAACCGTGTCCGCCACGGCTT
CTTCACCCGGCAGGGCGGCGTCTCGGAAGGGCTTTATCAGGGCCTCAATGTCGGCCTCGGTTCCCATGACGAACCCGAAA
AGGTGCAGGAAAACCGCCGGCGCGTGACGCAATGGTTCGGCCTTTCCGCTGATCGCCTCGCAACGGTGCATCAGGTCCAC
TCACCCGACGTCGTCGTTGTTGATGACAATTACGACGGCAACCGCCCGCAGGCCGACGCGATGGTCACGGCAACGCCGGG
TTTCGTGCTGGGCGTTTTGAGCGCCGATTGCGGACCTATCCTGTTTGCGGATGCACAAGCGGGCGTCGTGGGTGCGGCCC
ATGCCGGCTGGAAGGGCGCGCTCTTCGGTGTGCTCGAAAACACCATCGAAGCCATGGTGAAGCTTGGCGCCAGCCGCGAG
CGCATCGCCGCCTCGCTTGGCCCCTCGATCAGCCAGGATAATTATGAGGTCGGGCCGGAATATGTGGCGCGCTTCACCGA
TATCGATCCGGCCTATGCGGATTACTTCGCCGCGACGGAAAGGCAAGGCCACGCCTTGTTCGACCTCAAGCAATTCACCA
TCGACCGGCTGACGAAAGCTGGCGTGAAGGCGGAAAATCTCGGCCTCTGCACCTATCCCGACGAACATCGTTTCTATTCC
TACCGCCGCACCACCCACCGCGCCGAACCCGATTACGGCCGGCAGATTTCCGCAATCGCAATTCTGGAGGACTGA

Upstream 100 bases:

>100_bases
ACTGCATCACACCGCCACGCAATGCCGTGGCAACAGGAAACATCTCGCTTAACCCTGCTCCACTGGCCACCAGCGATATT
CTCCAAGGAATTCCCCCACC

Downstream 100 bases:

>100_bases
CATGGCCCTGCATTTCGAGCTTTCGGAATTCGATGCCCGCCGCGAGCGTCTGCTCACGAAAATGGCCGAGGAGAAGCTGG
ACGCCCTGCTGCTTTTTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MQNATLPLPLQSPLLAASGENRVRHGFFTRQGGVSEGLYQGLNVGLGSHDEPEKVQENRRRVTQWFGLSADRLATVHQVH
SPDVVVVDDNYDGNRPQADAMVTATPGFVLGVLSADCGPILFADAQAGVVGAAHAGWKGALFGVLENTIEAMVKLGASRE
RIAASLGPSISQDNYEVGPEYVARFTDIDPAYADYFAATERQGHALFDLKQFTIDRLTKAGVKAENLGLCTYPDEHRFYS
YRRTTHRAEPDYGRQISAIAILED

Sequences:

>Translated_264_residues
MQNATLPLPLQSPLLAASGENRVRHGFFTRQGGVSEGLYQGLNVGLGSHDEPEKVQENRRRVTQWFGLSADRLATVHQVH
SPDVVVVDDNYDGNRPQADAMVTATPGFVLGVLSADCGPILFADAQAGVVGAAHAGWKGALFGVLENTIEAMVKLGASRE
RIAASLGPSISQDNYEVGPEYVARFTDIDPAYADYFAATERQGHALFDLKQFTIDRLTKAGVKAENLGLCTYPDEHRFYS
YRRTTHRAEPDYGRQISAIAILED
>Mature_264_residues
MQNATLPLPLQSPLLAASGENRVRHGFFTRQGGVSEGLYQGLNVGLGSHDEPEKVQENRRRVTQWFGLSADRLATVHQVH
SPDVVVVDDNYDGNRPQADAMVTATPGFVLGVLSADCGPILFADAQAGVVGAAHAGWKGALFGVLENTIEAMVKLGASRE
RIAASLGPSISQDNYEVGPEYVARFTDIDPAYADYFAATERQGHALFDLKQFTIDRLTKAGVKAENLGLCTYPDEHRFYS
YRRTTHRAEPDYGRQISAIAILED

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=254, Percent_Identity=31.496062992126, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI190194372, Length=254, Percent_Identity=31.496062992126, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI1788945, Length=223, Percent_Identity=38.1165919282511, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 28762; Mature: 28762

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNATLPLPLQSPLLAASGENRVRHGFFTRQGGVSEGLYQGLNVGLGSHDEPEKVQENRR
CCCCCCCCCCCCCEEECCCCCCHHCCEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
RVTQWFGLSADRLATVHQVHSPDVVVVDDNYDGNRPQADAMVTATPGFVLGVLSADCGPI
HHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEHHHHCCCCCE
LFADAQAGVVGAAHAGWKGALFGVLENTIEAMVKLGASRERIAASLGPSISQDNYEVGPE
EEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHH
YVARFTDIDPAYADYFAATERQGHALFDLKQFTIDRLTKAGVKAENLGLCTYPDEHRFYS
HHHHHCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHH
YRRTTHRAEPDYGRQISAIAILED
HHHHHCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MQNATLPLPLQSPLLAASGENRVRHGFFTRQGGVSEGLYQGLNVGLGSHDEPEKVQENRR
CCCCCCCCCCCCCEEECCCCCCHHCCEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
RVTQWFGLSADRLATVHQVHSPDVVVVDDNYDGNRPQADAMVTATPGFVLGVLSADCGPI
HHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCEEHHHHCCCCCE
LFADAQAGVVGAAHAGWKGALFGVLENTIEAMVKLGASRERIAASLGPSISQDNYEVGPE
EEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHH
YVARFTDIDPAYADYFAATERQGHALFDLKQFTIDRLTKAGVKAENLGLCTYPDEHRFYS
HHHHHCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHH
YRRTTHRAEPDYGRQISAIAILED
HHHHHCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]