Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15889476

Identifier: 15889476

GI number: 15889476

Start: 2172107

End: 2172418

Strand: Direct

Name: 15889476

Synonym: Atu2198

Alternate gene names: NA

Gene position: 2172107-2172418 (Clockwise)

Preceding gene: 15889475

Following gene: 15889477

Centisome position: 76.44

GC content: 59.29

Gene sequence:

>312_bases
ATGTTTACCAACGATCGGACTTCCGTTGAAAGGTTAAGGGCGCAGAGAACGCTATTTTCCCTCTGGATGGCCGTTGCGGC
TTTTCTTGTCATCGTCACCATGGCCGCCGGCATCGCAACCTCGGCCAATGCGGCCACCGAAGCATTCGACACCCTGCACA
CCTCAGCCATTCCGCAGGTGGCGGCAACCACCAAGGCCGGCCCTCACCTGCTACTCATCGTTCTTTCAGCCGCAGCATTT
ATCGGTCTCGGCATTGGCGGCCTGACTCTGACCCGGCGCAGCCTGAAGGACGAGGCCCGCCGCTACAAATAA

Upstream 100 bases:

>100_bases
TGGCCGCAATAAATGCCGCGGAACGCCAGAATTCGGTCTCCAAGCCGTCCATTTCGGGGCCTCTTTTATCCTTTAAGAAC
AGGGACAAGAGGCGACAGCC

Downstream 100 bases:

>100_bases
GCCGCTCCCGCCTCGACTTGCGGCACCGGCACGTTGCTGCTAAAGCAACCGGGAAACAGCCATCCGCAACTTTGGATCGG
CATTTCAAAAAATCCCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MFTNDRTSVERLRAQRTLFSLWMAVAAFLVIVTMAAGIATSANAATEAFDTLHTSAIPQVAATTKAGPHLLLIVLSAAAF
IGLGIGGLTLTRRSLKDEARRYK

Sequences:

>Translated_103_residues
MFTNDRTSVERLRAQRTLFSLWMAVAAFLVIVTMAAGIATSANAATEAFDTLHTSAIPQVAATTKAGPHLLLIVLSAAAF
IGLGIGGLTLTRRSLKDEARRYK
>Mature_103_residues
MFTNDRTSVERLRAQRTLFSLWMAVAAFLVIVTMAAGIATSANAATEAFDTLHTSAIPQVAATTKAGPHLLLIVLSAAAF
IGLGIGGLTLTRRSLKDEARRYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10990; Mature: 10990

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTNDRTSVERLRAQRTLFSLWMAVAAFLVIVTMAAGIATSANAATEAFDTLHTSAIPQV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AATTKAGPHLLLIVLSAAAFIGLGIGGLTLTRRSLKDEARRYK
HHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFTNDRTSVERLRAQRTLFSLWMAVAAFLVIVTMAAGIATSANAATEAFDTLHTSAIPQV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AATTKAGPHLLLIVLSAAAFIGLGIGGLTLTRRSLKDEARRYK
HHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA