Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889442
Identifier: 15889442
GI number: 15889442
Start: 2129645
End: 2129980
Strand: Reverse
Name: 15889442
Synonym: Atu2163
Alternate gene names: NA
Gene position: 2129980-2129645 (Counterclockwise)
Preceding gene: 159185082
Following gene: 159185079
Centisome position: 74.96
GC content: 63.69
Gene sequence:
>336_bases ATGTTCAGCAACTTTGCAAAAGCCGGCCTGGCTACCCTCATCGCCATTGGTGGAATTTCCTTTACGGCGCCGGCTGCTTC CGCAGGCCCGGATGTCCAGTACCGGGTTCAGGTCCAGGATGGCTATGGTCATCGTCCCGGTTGGGGCCGCCCGGACCGCC CGCATCGCGGTTGCTCGGCCTCGCTTGCAGAAGAAAAAGCCAGCCGCATGGGCCTTCGCCGTGCCCGCGTGGTTGACGTG TCGCCGCGCCGTGTCGTGGTAGCAGGCTTTGACCGTCGCGGCCGTGATCGCATCGTTTTCGCCAATGAGCGCGGTTGCCC GGTTATTCGCCGCTAA
Upstream 100 bases:
>100_bases GAACATTCGGTTCTGCTGATATTCAGATGGGCGGGTCTAGGGTCTCGTCAATCGCCGGGGGATGTTCCCCTGTCGGCAAT GACACAAACGGAGTGAGTTC
Downstream 100 bases:
>100_bases CAGCAGCGATCTTCATTGATCTGTCGATATCCCCGTATGGCAGATCGATAAAAAATGCCCCTCGCTTCCGGAATGGCAGT GAGGGGCATTTCTTTTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MFSNFAKAGLATLIAIGGISFTAPAASAGPDVQYRVQVQDGYGHRPGWGRPDRPHRGCSASLAEEKASRMGLRRARVVDV SPRRVVVAGFDRRGRDRIVFANERGCPVIRR
Sequences:
>Translated_111_residues MFSNFAKAGLATLIAIGGISFTAPAASAGPDVQYRVQVQDGYGHRPGWGRPDRPHRGCSASLAEEKASRMGLRRARVVDV SPRRVVVAGFDRRGRDRIVFANERGCPVIRR >Mature_111_residues MFSNFAKAGLATLIAIGGISFTAPAASAGPDVQYRVQVQDGYGHRPGWGRPDRPHRGCSASLAEEKASRMGLRRARVVDV SPRRVVVAGFDRRGRDRIVFANERGCPVIRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12105; Mature: 12105
Theoretical pI: Translated: 11.98; Mature: 11.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSNFAKAGLATLIAIGGISFTAPAASAGPDVQYRVQVQDGYGHRPGWGRPDRPHRGCSA CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC SLAEEKASRMGLRRARVVDVSPRRVVVAGFDRRGRDRIVFANERGCPVIRR HHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MFSNFAKAGLATLIAIGGISFTAPAASAGPDVQYRVQVQDGYGHRPGWGRPDRPHRGCSA CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC SLAEEKASRMGLRRARVVDVSPRRVVVAGFDRRGRDRIVFANERGCPVIRR HHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA