Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is pleC [H]
Identifier: 15889187
GI number: 15889187
Start: 1867187
End: 1868722
Strand: Direct
Name: pleC [H]
Synonym: Atu1888
Alternate gene names: 15889187
Gene position: 1867187-1868722 (Clockwise)
Preceding gene: 15889182
Following gene: 15889190
Centisome position: 65.71
GC content: 59.64
Gene sequence:
>1536_bases ATGAGTAAAAGCGTCAGCACGTCCACCGACAAGATCATCGTCGACCGATCGAAGAAACACCGCAACAAGGCGGTTTTCGA CACGGTGAAGACGACGCGTGAACGCCTGCAGCAGGGTGCCGGCGGAAACGAAGCCTATGAACGCGAAATGCTGACCATGC ACATCGCCGAAGCCCTGCAGGGCGCGATGATCATGCCGCTTTTCATCGTGCTTGCCTCCATCATCGGCCTTTACATCACC GGCGATATCAGCCTGATCATCTGGTCGCTGATTGCGCTGAGTTTTCACGCCATGTCGCTGGTGCTGGCGAAACGGGCCGC CAAACAGGCGATCACCGACGACAATCTCCAGCATTGGAAAAACCTCTTTCTCGGCATGCAGATCCTCATCGGCTGCGCCT GGGCCATGTTCGCACTGGCCGAACCGGTGCGCAACGACCCGACGCTCGTTCTTTTCTTCAAGGGATCGACGCTGCTGATC GCCCTTTCGCTGACCGCCATGGCCAACTTCATGCTGCGGCGGGCAACCTTCATGACCTTCCTGCCGGTGCTGGCGGCGCT GTGCATAACCTCGGCGATTTCGCGCGATCCCTTCGATGTCGGTCTGGCGCTGATGTTCGGCATGGCGATCCTCTTCTGTC ATCGCATCACCAGCCGGCTTTACCAGACCAGCATCAAGCTCCTGTCCTCTCAGACGGAAAAGGACGACCTGATCGCCGAA CTCGAGGTCGCCAATTCCGTGTCCGACGAAGCGCGGCGACGTGCTGAAGAGGCCAATCTGGCGAAATCGCGTTTTCTCGC TTCCATGTCGCACGAGCTGCGCACGCCGCTCAACGCCATTCTCGGCTTTTCCGAGGTCATGTCGTCAGAGGTGCTCGGTC CGCTCAACAACCCGCTCTACAAGGAATATTCCGGCGATATCCACCGCTCCGGCCAGCATCTGCTCGATCTCATCAACGAA ATCCTCGACCTCTCACGCATCGAGGCCGGCCGCTACGATCTCAACGAGGAATCCATCTCCATGCTGGAAATCGCCGAGGA TTGCATCGGCATGATCCAGCTGCGCGCCCGCGCCAAGAACATCAGGATTTCCCAGCAGTTCGAAGCCAGTCTGCCGCAAG TCTGGGCCGATGAGAAATCCATCCGCCAGGTCATACTCAACCTGCTCTCCAATGCCGTGAAATTCACCCCGCAGGGCGGC GAGATTCTCGTGAAGGCGGGCTGGACGGCGGGCGGTGGGCAATATGTGTCGATCAGGGATAACGGCCCCGGCATTCCGGA AGATGAAATCCCCGTGGTGCTCTCGGCCTTCGGCCAGGGATCGATCGCGATCAAGAGCGCGGAACAGGGAACGGGCCTTG GCCTGCCCATCGTTCAGGCCATTCTCGCCAAGCACGACGGCCAGTTCATCCTGAAATCGAAGTTGCGCGAAGGCACCGAA GGCATCGCCATCCTGCCGGCAAAACGCGTTCTGCAAAGCCTGCCGGCGGTGGAAGAAACTCACGCCATCCAGCCGCGCCG GCGGTCTTTCGCCTAG
Upstream 100 bases:
>100_bases CAAACCCTTGTCAGAAATGGCAAACAAATCCTTTCACGGCAGCATCTTCTTAAGATTTTGGGCGTAGCCTGCAAGGGTTC ATGTCACCTGCGTTGTAACA
Downstream 100 bases:
>100_bases AGCGCACCAAAGCTCAGAAGAACAGCGTCGTCACCAGCGAATACAGCACGAAAAATCCGTTCGCCAGCAACAGACAGAAG ACGGCAAAGGAGCCGAGATC
Product: two component sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MSKSVSTSTDKIIVDRSKKHRNKAVFDTVKTTRERLQQGAGGNEAYEREMLTMHIAEALQGAMIMPLFIVLASIIGLYIT GDISLIIWSLIALSFHAMSLVLAKRAAKQAITDDNLQHWKNLFLGMQILIGCAWAMFALAEPVRNDPTLVLFFKGSTLLI ALSLTAMANFMLRRATFMTFLPVLAALCITSAISRDPFDVGLALMFGMAILFCHRITSRLYQTSIKLLSSQTEKDDLIAE LEVANSVSDEARRRAEEANLAKSRFLASMSHELRTPLNAILGFSEVMSSEVLGPLNNPLYKEYSGDIHRSGQHLLDLINE ILDLSRIEAGRYDLNEESISMLEIAEDCIGMIQLRARAKNIRISQQFEASLPQVWADEKSIRQVILNLLSNAVKFTPQGG EILVKAGWTAGGGQYVSIRDNGPGIPEDEIPVVLSAFGQGSIAIKSAEQGTGLGLPIVQAILAKHDGQFILKSKLREGTE GIAILPAKRVLQSLPAVEETHAIQPRRRSFA
Sequences:
>Translated_511_residues MSKSVSTSTDKIIVDRSKKHRNKAVFDTVKTTRERLQQGAGGNEAYEREMLTMHIAEALQGAMIMPLFIVLASIIGLYIT GDISLIIWSLIALSFHAMSLVLAKRAAKQAITDDNLQHWKNLFLGMQILIGCAWAMFALAEPVRNDPTLVLFFKGSTLLI ALSLTAMANFMLRRATFMTFLPVLAALCITSAISRDPFDVGLALMFGMAILFCHRITSRLYQTSIKLLSSQTEKDDLIAE LEVANSVSDEARRRAEEANLAKSRFLASMSHELRTPLNAILGFSEVMSSEVLGPLNNPLYKEYSGDIHRSGQHLLDLINE ILDLSRIEAGRYDLNEESISMLEIAEDCIGMIQLRARAKNIRISQQFEASLPQVWADEKSIRQVILNLLSNAVKFTPQGG EILVKAGWTAGGGQYVSIRDNGPGIPEDEIPVVLSAFGQGSIAIKSAEQGTGLGLPIVQAILAKHDGQFILKSKLREGTE GIAILPAKRVLQSLPAVEETHAIQPRRRSFA >Mature_510_residues SKSVSTSTDKIIVDRSKKHRNKAVFDTVKTTRERLQQGAGGNEAYEREMLTMHIAEALQGAMIMPLFIVLASIIGLYITG DISLIIWSLIALSFHAMSLVLAKRAAKQAITDDNLQHWKNLFLGMQILIGCAWAMFALAEPVRNDPTLVLFFKGSTLLIA LSLTAMANFMLRRATFMTFLPVLAALCITSAISRDPFDVGLALMFGMAILFCHRITSRLYQTSIKLLSSQTEKDDLIAEL EVANSVSDEARRRAEEANLAKSRFLASMSHELRTPLNAILGFSEVMSSEVLGPLNNPLYKEYSGDIHRSGQHLLDLINEI LDLSRIEAGRYDLNEESISMLEIAEDCIGMIQLRARAKNIRISQQFEASLPQVWADEKSIRQVILNLLSNAVKFTPQGGE ILVKAGWTAGGGQYVSIRDNGPGIPEDEIPVVLSAFGQGSIAIKSAEQGTGLGLPIVQAILAKHDGQFILKSKLREGTEG IAILPAKRVLQSLPAVEETHAIQPRRRSFA
Specific function: Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator pleD, leading to its activation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=247, Percent_Identity=34.0080971659919, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI1788713, Length=277, Percent_Identity=32.129963898917, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI87081816, Length=214, Percent_Identity=36.9158878504673, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI48994928, Length=232, Percent_Identity=31.8965517241379, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1786912, Length=290, Percent_Identity=29.6551724137931, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI145693157, Length=294, Percent_Identity=29.5918367346939, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1786600, Length=231, Percent_Identity=29.4372294372294, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI87082128, Length=210, Percent_Identity=30, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1788549, Length=271, Percent_Identity=25.4612546125461, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1790300, Length=240, Percent_Identity=26.6666666666667, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790436, Length=240, Percent_Identity=24.5833333333333, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788393, Length=240, Percent_Identity=25.8333333333333, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786783, Length=237, Percent_Identity=27.0042194092827, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1790551, Length=224, Percent_Identity=27.6785714285714, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1788279, Length=205, Percent_Identity=26.3414634146341, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=148, Percent_Identity=33.1081081081081, Blast_Score=63, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 56214; Mature: 56083
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSVSTSTDKIIVDRSKKHRNKAVFDTVKTTRERLQQGAGGNEAYEREMLTMHIAEALQ CCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC GAMIMPLFIVLASIIGLYITGDISLIIWSLIALSFHAMSLVLAKRAAKQAITDDNLQHWK CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH NLFLGMQILIGCAWAMFALAEPVRNDPTLVLFFKGSTLLIALSLTAMANFMLRRATFMTF HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHH LPVLAALCITSAISRDPFDVGLALMFGMAILFCHRITSRLYQTSIKLLSSQTEKDDLIAE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LEVANSVSDEARRRAEEANLAKSRFLASMSHELRTPLNAILGFSEVMSSEVLGPLNNPLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH KEYSGDIHRSGQHLLDLINEILDLSRIEAGRYDLNEESISMLEIAEDCIGMIQLRARAKN HHHCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC IRISQQFEASLPQVWADEKSIRQVILNLLSNAVKFTPQGGEILVKAGWTAGGGQYVSIRD CCCHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCEEEEEEC NGPGIPEDEIPVVLSAFGQGSIAIKSAEQGTGLGLPIVQAILAKHDGQFILKSKLREGTE CCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCC GIAILPAKRVLQSLPAVEETHAIQPRRRSFA CEEECCHHHHHHHCCCHHHHHCCCCHHHCCC >Mature Secondary Structure SKSVSTSTDKIIVDRSKKHRNKAVFDTVKTTRERLQQGAGGNEAYEREMLTMHIAEALQ CCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC GAMIMPLFIVLASIIGLYITGDISLIIWSLIALSFHAMSLVLAKRAAKQAITDDNLQHWK CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH NLFLGMQILIGCAWAMFALAEPVRNDPTLVLFFKGSTLLIALSLTAMANFMLRRATFMTF HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHH LPVLAALCITSAISRDPFDVGLALMFGMAILFCHRITSRLYQTSIKLLSSQTEKDDLIAE HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LEVANSVSDEARRRAEEANLAKSRFLASMSHELRTPLNAILGFSEVMSSEVLGPLNNPLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH KEYSGDIHRSGQHLLDLINEILDLSRIEAGRYDLNEESISMLEIAEDCIGMIQLRARAKN HHHCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC IRISQQFEASLPQVWADEKSIRQVILNLLSNAVKFTPQGGEILVKAGWTAGGGQYVSIRD CCCHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCEEEEEEC NGPGIPEDEIPVVLSAFGQGSIAIKSAEQGTGLGLPIVQAILAKHDGQFILKSKLREGTE CCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCC GIAILPAKRVLQSLPAVEETHAIQPRRRSFA CEEECCHHHHHHHCCCHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]