Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15889105

Identifier: 15889105

GI number: 15889105

Start: 1787627

End: 1787818

Strand: Reverse

Name: 15889105

Synonym: Atu1801

Alternate gene names: NA

Gene position: 1787818-1787627 (Counterclockwise)

Preceding gene: 159184924

Following gene: 159184923

Centisome position: 62.92

GC content: 54.17

Gene sequence:

>192_bases
TTGAGCGAATACGGGCGGTTTTTCGCGCACTTGCCTTGTCCCGAGGGGATGAGGCATAGTCCGCGAATCAAAAACGGCCT
GTTCCGTTTCGGGGAAGCGCACGATTCCGTTGCCGTGCTGCTGGTGAAAATGCAAGATACGGAGGCCATCCATGAAAACT
GCAGAGAATGCGAAAGGACGCCTTTCCTGTAA

Upstream 100 bases:

>100_bases
ACCTGATGGTATTTCATTCGAAATTTTGCAGAAAGGCGAAAGCCTCGCACCAGCCGAACCGTGGATATCTATGCAGAATA
CCGGTTCCTGGTAGGGTTTT

Downstream 100 bases:

>100_bases
GCGTTTTGTCGTCGCGGTTTCGCTGCTCGGGCTTTCCGGTTGCGTTTCGGCGGTGACGGATGACGAGATGGCCGCCACGA
CAAAGAAGCCGGAAATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MSEYGRFFAHLPCPEGMRHSPRIKNGLFRFGEAHDSVAVLLVKMQDTEAIHENCRECERTPFL

Sequences:

>Translated_63_residues
MSEYGRFFAHLPCPEGMRHSPRIKNGLFRFGEAHDSVAVLLVKMQDTEAIHENCRECERTPFL
>Mature_62_residues
SEYGRFFAHLPCPEGMRHSPRIKNGLFRFGEAHDSVAVLLVKMQDTEAIHENCRECERTPFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7306; Mature: 7175

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEYGRFFAHLPCPEGMRHSPRIKNGLFRFGEAHDSVAVLLVKMQDTEAIHENCRECERT
CCCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCC
PFL
CCC
>Mature Secondary Structure 
SEYGRFFAHLPCPEGMRHSPRIKNGLFRFGEAHDSVAVLLVKMQDTEAIHENCRECERT
CCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCC
PFL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA