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The map label for this gene is yahD [C]

Identifier: 15889101

GI number: 15889101

Start: 1784548

End: 1785105

Strand: Reverse

Name: yahD [C]

Synonym: Atu1798

Alternate gene names: 15889101

Gene position: 1785105-1784548 (Counterclockwise)

Preceding gene: 159185411

Following gene: 159184921

Centisome position: 62.82

GC content: 57.17

Gene sequence:

>558_bases
ATGCTACTGCGCTGGTCTCTCATCGTCCTGCTGACTTTCGGACTTTCCCTCGATTCCGCCGCTGCGACGGAAACCGACGC
GGTGGGCGCCTTCCACCACGCCGTTCAGGTGGGCGATGTCCAAACCATTCGAACCATGATTGCGGCTGACCCCGGTTTGG
CCACGTCAAGGGACAAGTTCGGTTTCCAGCCGATCCATCTTCTCGACATGTACCCCGAAGAGGAGGTGCTCAACCTTCTG
CTTAAAAATGGTGCCGACATCAACGCAGCGAATGACGAAGGCGTCACCATCCTCCATATCATCACCGATCCAGACACCGT
TTCCCTGCTTGTAAAGCGCGGTGCGAATATCGAGGCCCGCGATGAGAGGGGATGGACGCCATTGATCATGCAGGCGAATA
ATCAGCAGAACGGCCCCGATGTGGTGGCTGCGCTTCTGGCCCAAGGTGCAGACCCGAATGCCGAGGGCTTCGCGGGTGAG
ACTGCTCTCTCATTTGCAAAACAAACTGGCGACGCGGCTCTTGTCCGTATGCTGATCGCAAGTGGTGCAAAGAATTAG

Upstream 100 bases:

>100_bases
GGTGGGGGCGTGCCGGCATGATGAATTTATCGGCTGACAAAGACCGGAACCTGAACTAGACATAATATATTAGACGGCGA
TACTCACAACGTGGATCGCA

Downstream 100 bases:

>100_bases
CGCTGGCGGTTTAGAGAGTGTCTGTGCCGCCGCTACAAAGAAGCGAGGCTATGCATCACGTCGGTCACAGCAATGTCCGC
AGCGCTGACAGGAGCATTCG

Product: ankyrin repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MLLRWSLIVLLTFGLSLDSAAATETDAVGAFHHAVQVGDVQTIRTMIAADPGLATSRDKFGFQPIHLLDMYPEEEVLNLL
LKNGADINAANDEGVTILHIITDPDTVSLLVKRGANIEARDERGWTPLIMQANNQQNGPDVVAALLAQGADPNAEGFAGE
TALSFAKQTGDAALVRMLIASGAKN

Sequences:

>Translated_185_residues
MLLRWSLIVLLTFGLSLDSAAATETDAVGAFHHAVQVGDVQTIRTMIAADPGLATSRDKFGFQPIHLLDMYPEEEVLNLL
LKNGADINAANDEGVTILHIITDPDTVSLLVKRGANIEARDERGWTPLIMQANNQQNGPDVVAALLAQGADPNAEGFAGE
TALSFAKQTGDAALVRMLIASGAKN
>Mature_185_residues
MLLRWSLIVLLTFGLSLDSAAATETDAVGAFHHAVQVGDVQTIRTMIAADPGLATSRDKFGFQPIHLLDMYPEEEVLNLL
LKNGADINAANDEGVTILHIITDPDTVSLLVKRGANIEARDERGWTPLIMQANNQQNGPDVVAALLAQGADPNAEGFAGE
TALSFAKQTGDAALVRMLIASGAKN

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 18 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI30425444, Length=170, Percent_Identity=30, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI70780353, Length=156, Percent_Identity=34.6153846153846, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI70780357, Length=156, Percent_Identity=34.6153846153846, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI215598574, Length=156, Percent_Identity=34.6153846153846, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI70780359, Length=156, Percent_Identity=34.6153846153846, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI70780355, Length=156, Percent_Identity=34.6153846153846, Blast_Score=75, Evalue=2e-14,
Organism=Homo sapiens, GI52426735, Length=171, Percent_Identity=31.5789473684211, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI188595682, Length=171, Percent_Identity=31.5789473684211, Blast_Score=71, Evalue=5e-13,
Organism=Homo sapiens, GI52426737, Length=171, Percent_Identity=31.5789473684211, Blast_Score=71, Evalue=5e-13,
Organism=Homo sapiens, GI32967601, Length=168, Percent_Identity=30.952380952381, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI13376842, Length=146, Percent_Identity=32.8767123287671, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI24233530, Length=129, Percent_Identity=35.6589147286822, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI255982572, Length=160, Percent_Identity=30, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI121582655, Length=154, Percent_Identity=33.1168831168831, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71981411, Length=181, Percent_Identity=32.5966850828729, Blast_Score=73, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI71981414, Length=182, Percent_Identity=32.967032967033, Blast_Score=71, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI25145251, Length=182, Percent_Identity=32.967032967033, Blast_Score=70, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17542700, Length=182, Percent_Identity=32.967032967033, Blast_Score=70, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71981389, Length=182, Percent_Identity=32.967032967033, Blast_Score=70, Evalue=4e-13,
Organism=Drosophila melanogaster, GI161082110, Length=180, Percent_Identity=33.8888888888889, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI161082096, Length=180, Percent_Identity=33.8888888888889, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI161082081, Length=180, Percent_Identity=33.8888888888889, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI161082106, Length=180, Percent_Identity=33.8888888888889, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI161082089, Length=180, Percent_Identity=33.8888888888889, Blast_Score=77, Evalue=5e-15,
Organism=Drosophila melanogaster, GI161082085, Length=180, Percent_Identity=33.8888888888889, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161082099, Length=180, Percent_Identity=33.8888888888889, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281359521, Length=183, Percent_Identity=29.5081967213115, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI281359519, Length=183, Percent_Identity=29.5081967213115, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI28558752, Length=183, Percent_Identity=29.5081967213115, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI28558750, Length=183, Percent_Identity=29.5081967213115, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI28558756, Length=183, Percent_Identity=29.5081967213115, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI28558754, Length=183, Percent_Identity=29.5081967213115, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI161082092, Length=128, Percent_Identity=33.59375, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR007685 [H]

Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]

EC number: NA

Molecular weight: Translated: 19630; Mature: 19630

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRWSLIVLLTFGLSLDSAAATETDAVGAFHHAVQVGDVQTIRTMIAADPGLATSRDKF
CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC
GFQPIHLLDMYPEEEVLNLLLKNGADINAANDEGVTILHIITDPDTVSLLVKRGANIEAR
CCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCCCC
DERGWTPLIMQANNQQNGPDVVAALLAQGADPNAEGFAGETALSFAKQTGDAALVRMLIA
CCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
SGAKN
CCCCC
>Mature Secondary Structure
MLLRWSLIVLLTFGLSLDSAAATETDAVGAFHHAVQVGDVQTIRTMIAADPGLATSRDKF
CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCC
GFQPIHLLDMYPEEEVLNLLLKNGADINAANDEGVTILHIITDPDTVSLLVKRGANIEAR
CCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCCCC
DERGWTPLIMQANNQQNGPDVVAALLAQGADPNAEGFAGETALSFAKQTGDAALVRMLIA
CCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHH
SGAKN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA