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The map label for this gene is mdcF [H]

Identifier: 15889099

GI number: 15889099

Start: 1782308

End: 1783246

Strand: Reverse

Name: mdcF [H]

Synonym: Atu1795

Alternate gene names: 15889099

Gene position: 1783246-1782308 (Counterclockwise)

Preceding gene: 159184921

Following gene: 159184920

Centisome position: 62.76

GC content: 61.34

Gene sequence:

>939_bases
GTGGCTGATATCATTGGACTGCTGTTGCCGTTTTTTGGCCTGATCTTCATCGGCTACGGTGCAGCGCGCATAACAAAACA
GCCGGTCGAGGCGATGGGCTGGCTGAATACCTTCATTATCTATGCCGCTCTGCCGGCGCTGTTTTTCAAGCTTGTCTCCA
AGACGCCTGTGGAAGAGCTGGCACGGATGGATTTTGTCGCCGCCAGCCTTGCCTGCACCTACGGCATTTTCTTGGCTGTG
TTCCTGATCGGCCGATTCGTGCGCCGGAACAGCCTCGCCGAAACCACCATCCAGAGTTTCGCGGCCAGCTACGGCAATAT
CGGTTACATGGGGCCGGGGCTTGCGCTCCTGGCGCTTGGCGAGAAGGCGGCGGTGCCGGTGGCGCTGATCGTCTGCCTTG
AAAACGCCGCCCATTTCATCGTCGCGCCGGCGATGATGGCGGTTGCGGGCGGGGACAAGCGCTCAGCCGGCAAGCTCGCG
CTGGATGTGGCGCGCAAGGTCATCACCCATCCGTTCATCGTGTCCGTTATCGCCGGATTTCTCGCTGCTTCGCTGTCGTG
GCAGCCACCGGAGGCGGTGCAGCGGCTGGTGGATTATCTGGCGCAGTCGGCCGCCCCCTGCGCGCTGTTTGCCATGGGGG
TGACGCTGGCGCTGCGGCCGATGAAACGCGTTCCGGTGGAGATCAGCTATATCGTGCCGGCCAAGCTGATATTGCATCCG
CTCGCCGCTTATCTGGTGCTATCATCGCTGGGGCGCTTCGAGCCGGTGTGGATTTATTCCGCGGTGCTGCTGGCGGCGCT
GCCGACCGCGACGAATGTCTTCGTCATCGGCCAGCAATATCACGTCTGGCAGGAGAGGGCGTCAGCGACGATCCTGATCT
CGACGGTGCTGTCGGTCTTCACGCTGACGGGCGTGGTTTATTTCATCCAGCCTTTTTGA

Upstream 100 bases:

>100_bases
CATGTCCGGTTTCATCACCAATGTCGCGATCTGGTTCCAGGAGACCTTTCCGATCCTGATGCAAATCGGCTAAGCCTCTC
GCGGATGTGAGGGAACGACC

Downstream 100 bases:

>100_bases
AGCTGCCGAACAGCAATGATGGCAAGGCCTTCAATCCGCGCCCCGGCTCGATGCCTTCGCGCATCACCATGCTTCTGAGC
GTGCCGATGCCGGAGAGTAC

Product: malonate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MADIIGLLLPFFGLIFIGYGAARITKQPVEAMGWLNTFIIYAALPALFFKLVSKTPVEELARMDFVAASLACTYGIFLAV
FLIGRFVRRNSLAETTIQSFAASYGNIGYMGPGLALLALGEKAAVPVALIVCLENAAHFIVAPAMMAVAGGDKRSAGKLA
LDVARKVITHPFIVSVIAGFLAASLSWQPPEAVQRLVDYLAQSAAPCALFAMGVTLALRPMKRVPVEISYIVPAKLILHP
LAAYLVLSSLGRFEPVWIYSAVLLAALPTATNVFVIGQQYHVWQERASATILISTVLSVFTLTGVVYFIQPF

Sequences:

>Translated_312_residues
MADIIGLLLPFFGLIFIGYGAARITKQPVEAMGWLNTFIIYAALPALFFKLVSKTPVEELARMDFVAASLACTYGIFLAV
FLIGRFVRRNSLAETTIQSFAASYGNIGYMGPGLALLALGEKAAVPVALIVCLENAAHFIVAPAMMAVAGGDKRSAGKLA
LDVARKVITHPFIVSVIAGFLAASLSWQPPEAVQRLVDYLAQSAAPCALFAMGVTLALRPMKRVPVEISYIVPAKLILHP
LAAYLVLSSLGRFEPVWIYSAVLLAALPTATNVFVIGQQYHVWQERASATILISTVLSVFTLTGVVYFIQPF
>Mature_311_residues
ADIIGLLLPFFGLIFIGYGAARITKQPVEAMGWLNTFIIYAALPALFFKLVSKTPVEELARMDFVAASLACTYGIFLAVF
LIGRFVRRNSLAETTIQSFAASYGNIGYMGPGLALLALGEKAAVPVALIVCLENAAHFIVAPAMMAVAGGDKRSAGKLAL
DVARKVITHPFIVSVIAGFLAASLSWQPPEAVQRLVDYLAQSAAPCALFAMGVTLALRPMKRVPVEISYIVPAKLILHPL
AAYLVLSSLGRFEPVWIYSAVLLAALPTATNVFVIGQQYHVWQERASATILISTVLSVFTLTGVVYFIQPF

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 33539; Mature: 33408

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIIGLLLPFFGLIFIGYGAARITKQPVEAMGWLNTFIIYAALPALFFKLVSKTPVEEL
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ARMDFVAASLACTYGIFLAVFLIGRFVRRNSLAETTIQSFAASYGNIGYMGPGLALLALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC
EKAAVPVALIVCLENAAHFIVAPAMMAVAGGDKRSAGKLALDVARKVITHPFIVSVIAGF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAASLSWQPPEAVQRLVDYLAQSAAPCALFAMGVTLALRPMKRVPVEISYIVPAKLILHP
HHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHH
LAAYLVLSSLGRFEPVWIYSAVLLAALPTATNVFVIGQQYHVWQERASATILISTVLSVF
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHH
TLTGVVYFIQPF
HHHHHHHHCCCC
>Mature Secondary Structure 
ADIIGLLLPFFGLIFIGYGAARITKQPVEAMGWLNTFIIYAALPALFFKLVSKTPVEEL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ARMDFVAASLACTYGIFLAVFLIGRFVRRNSLAETTIQSFAASYGNIGYMGPGLALLALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC
EKAAVPVALIVCLENAAHFIVAPAMMAVAGGDKRSAGKLALDVARKVITHPFIVSVIAGF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAASLSWQPPEAVQRLVDYLAQSAAPCALFAMGVTLALRPMKRVPVEISYIVPAKLILHP
HHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHH
LAAYLVLSSLGRFEPVWIYSAVLLAALPTATNVFVIGQQYHVWQERASATILISTVLSVF
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHH
TLTGVVYFIQPF
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10858449; 11481430 [H]