Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yedL [C]
Identifier: 15889043
GI number: 15889043
Start: 1727586
End: 1728041
Strand: Reverse
Name: yedL [C]
Synonym: Atu1740
Alternate gene names: 15889043
Gene position: 1728041-1727586 (Counterclockwise)
Preceding gene: 15889045
Following gene: 159184893
Centisome position: 60.81
GC content: 60.53
Gene sequence:
>456_bases TTGGCCATCGAAATCAAGCTTGAAACGCCGCGCCAGGAAGCCGTTCTGCGCCTCATCGATCTCTCCAACGCCTATATGGC CTCGCTTTATCCGGCCGAGAGCAATCACCTGGTCGATATCGGCGCGCTCGAGAAGGACAATGTCTCGTTTTTCGTGGCCC GGCACGATGGCCGAGTGGTCGGCTGCGGTGCGCTGGTGGAGGCGGGTGACGGCACGGCGGAGGTGAAGCGCATGTTCGTT GATCCCGAGGCGCGGGGTTTGCGGATCGGCAAGCTGATCATGGATACGCTTGTTGCGCGTGGCACGGAGCTTGGTCTTTC CGCCATACGGCTCGAAACCGGCATCAGCCAGCCGGAGGCGATCGGCCTTTACCGCAAGGAGGGATTTGTGGAGATAGAGG CCTTTGCGCCTTATAAGCCCGATCCGCTGAGCCTGTTCATGGAGAGGGCGCTTTAA
Upstream 100 bases:
>100_bases GGTTGCCTCTGTCGGGAATAATGCTCTAGAAACTCATCTATCCCGATTGCAGTGACATTACGACGAAATACGCATTTTTT GAAAGAAAGCAGGCATCGCA
Downstream 100 bases:
>100_bases GTCTACGGCACAGGTTCGCCTCTACCTTGCAGTGTCCGAAACGAAGGAATTGACACGCCATGAAAAGTAGAGCGGACGAC GGACAACAGATCGCGTCAAG
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MAIEIKLETPRQEAVLRLIDLSNAYMASLYPAESNHLVDIGALEKDNVSFFVARHDGRVVGCGALVEAGDGTAEVKRMFV DPEARGLRIGKLIMDTLVARGTELGLSAIRLETGISQPEAIGLYRKEGFVEIEAFAPYKPDPLSLFMERAL
Sequences:
>Translated_151_residues MAIEIKLETPRQEAVLRLIDLSNAYMASLYPAESNHLVDIGALEKDNVSFFVARHDGRVVGCGALVEAGDGTAEVKRMFV DPEARGLRIGKLIMDTLVARGTELGLSAIRLETGISQPEAIGLYRKEGFVEIEAFAPYKPDPLSLFMERAL >Mature_150_residues AIEIKLETPRQEAVLRLIDLSNAYMASLYPAESNHLVDIGALEKDNVSFFVARHDGRVVGCGALVEAGDGTAEVKRMFVD PEARGLRIGKLIMDTLVARGTELGLSAIRLETGISQPEAIGLYRKEGFVEIEAFAPYKPDPLSLFMERAL
Specific function: Participates in the tryptophan-dependent indole-3-acetic acid production, which is a phytohormone released by A.brasilense [H]
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 16534; Mature: 16403
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEIKLETPRQEAVLRLIDLSNAYMASLYPAESNHLVDIGALEKDNVSFFVARHDGRVV CEEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEEECCCEEE GCGALVEAGDGTAEVKRMFVDPEARGLRIGKLIMDTLVARGTELGLSAIRLETGISQPEA EECEEEECCCCHHHHEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHH IGLYRKEGFVEIEAFAPYKPDPLSLFMERAL EEEEECCCCEEEEEECCCCCCHHHHHHHHCC >Mature Secondary Structure AIEIKLETPRQEAVLRLIDLSNAYMASLYPAESNHLVDIGALEKDNVSFFVARHDGRVV EEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEEECCCEEE GCGALVEAGDGTAEVKRMFVDPEARGLRIGKLIMDTLVARGTELGLSAIRLETGISQPEA EECEEEECCCCHHHHEEEEECCCCCCEEHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHH IGLYRKEGFVEIEAFAPYKPDPLSLFMERAL EEEEECCCCEEEEEECCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1896020 [H]