Click here to switch to the map view.

The map label for this gene is 15888981

Identifier: 15888981

GI number: 15888981

Start: 1662248

End: 1663345

Strand: Direct

Name: 15888981

Synonym: Atu1675

Alternate gene names: NA

Gene position: 1662248-1663345 (Clockwise)

Preceding gene: 159184868

Following gene: 15888988

Centisome position: 58.5

GC content: 56.65

Gene sequence:

>1098_bases
ATGGTGTGTACCGCGTGGAATATTGACGGGCTTGCGGAGATTTTTTCGGACGCGGCACTCGGGCGCCAAACCTGGCGACA
TGCCCTTGACGCATTAAGCGAGGGAATTGGAGCGACCGGCGCCGCGTTTATACCACTCAAGGGCGCAGCAGCGCAGCTCC
CAACAAGTTCGAGCTGCGTGGAGTTAGTCGATCAATATTTGAAGGACGGTTGGAGCAAGGCCGATCCACGCTTTCGTGGA
GTTTCGATGTTGTATCGCGAGGGTTTAGTTACGGATCTGGATTGCCTGACTGTAGAGGAAATAACCAGAGACCCCTTTTA
TCAGGAACTACTCCGCCCTTTCGGTCTGAAGTGGTTCGCCGGAATAAGGATAAAAGGACTTGAGGAGGAGTGGGCGCTGT
CCATACAGCGGTCTGAGGCGCAAGGACCGTTTTGCGACGCCGAGACCGGCCTGCTTCTACGCTTGTCCACGAGCCTGTCG
GCCAACGCCTTGCTTGCCGAGACGCTTGCGTCCTCCAGCGCCGTTGCAGCGCTTGAGACTTTCAATTTAAGCGACAAGGC
GGTTGTGATGTTGAACCGCCTGGGCGAGGTCGTTCGCACCACTGTTGCGGCCGATAAGATGTTTGACGACGATCTGCGTA
TTCGGGACAAACGCCTTGTTTCGGCATGCCGACAGTCGGCGACGCGGCTCGAACGCGCCATCGGTCGGGCATGCACGCAT
CCACAGGAATGTTTTAACAACCCCGTATTGTTAAAAAGGTGGAACTCGACGCCAGTCGTCGCCTTTGTTTCTCCTGCTAG
AGGCGTCGCCAGAGACATTTTTTCACCCTGCCAGACCTATGTCATCCTGGTCGATCCATACGAGCGCGGCACACCGGCAG
CGGCGGTTCTGCAAGAACTTTTCGGCCTGACCCGCACCGAGGCCGCATTGGCTGGACGTTTGTCTCGCGGAGAAGCCCTG
CGTGACATCGCGCGCGTCATGGCAATGTCCTACGAAACGGCCAGAACTCATCTTCGCAGCGTGTTCGCCAAAACTGGCCT
GAACGATCAGGCCGATCTCGTCGCGTTTCTTTTACGCCTGGATACAGGAATGAATTAG

Upstream 100 bases:

>100_bases
AAAAAATCATTAAACTACAGATAGACTTCAACATTTAGAGATATACTATACTGTAAACTTTAATTATTATTTAGTAATAC
TTAAATCTCAAAGGCAACCC

Downstream 100 bases:

>100_bases
CAGATCACCCCCGCAGCAACCTGTCCCCCACCGCGAATTTCGATTTCAGCAGACACTCATCATATTCCGCCTCCGCCACG
GAATCGAACACGATGCCGCC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator LuxR Family; Regulatory Protein LuxR

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MVCTAWNIDGLAEIFSDAALGRQTWRHALDALSEGIGATGAAFIPLKGAAAQLPTSSSCVELVDQYLKDGWSKADPRFRG
VSMLYREGLVTDLDCLTVEEITRDPFYQELLRPFGLKWFAGIRIKGLEEEWALSIQRSEAQGPFCDAETGLLLRLSTSLS
ANALLAETLASSSAVAALETFNLSDKAVVMLNRLGEVVRTTVAADKMFDDDLRIRDKRLVSACRQSATRLERAIGRACTH
PQECFNNPVLLKRWNSTPVVAFVSPARGVARDIFSPCQTYVILVDPYERGTPAAAVLQELFGLTRTEAALAGRLSRGEAL
RDIARVMAMSYETARTHLRSVFAKTGLNDQADLVAFLLRLDTGMN

Sequences:

>Translated_365_residues
MVCTAWNIDGLAEIFSDAALGRQTWRHALDALSEGIGATGAAFIPLKGAAAQLPTSSSCVELVDQYLKDGWSKADPRFRG
VSMLYREGLVTDLDCLTVEEITRDPFYQELLRPFGLKWFAGIRIKGLEEEWALSIQRSEAQGPFCDAETGLLLRLSTSLS
ANALLAETLASSSAVAALETFNLSDKAVVMLNRLGEVVRTTVAADKMFDDDLRIRDKRLVSACRQSATRLERAIGRACTH
PQECFNNPVLLKRWNSTPVVAFVSPARGVARDIFSPCQTYVILVDPYERGTPAAAVLQELFGLTRTEAALAGRLSRGEAL
RDIARVMAMSYETARTHLRSVFAKTGLNDQADLVAFLLRLDTGMN
>Mature_365_residues
MVCTAWNIDGLAEIFSDAALGRQTWRHALDALSEGIGATGAAFIPLKGAAAQLPTSSSCVELVDQYLKDGWSKADPRFRG
VSMLYREGLVTDLDCLTVEEITRDPFYQELLRPFGLKWFAGIRIKGLEEEWALSIQRSEAQGPFCDAETGLLLRLSTSLS
ANALLAETLASSSAVAALETFNLSDKAVVMLNRLGEVVRTTVAADKMFDDDLRIRDKRLVSACRQSATRLERAIGRACTH
PQECFNNPVLLKRWNSTPVVAFVSPARGVARDIFSPCQTYVILVDPYERGTPAAAVLQELFGLTRTEAALAGRLSRGEAL
RDIARVMAMSYETARTHLRSVFAKTGLNDQADLVAFLLRLDTGMN

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40010; Mature: 40010

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCTAWNIDGLAEIFSDAALGRQTWRHALDALSEGIGATGAAFIPLKGAAAQLPTSSSCV
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHCCCCCHHHH
ELVDQYLKDGWSKADPRFRGVSMLYREGLVTDLDCLTVEEITRDPFYQELLRPFGLKWFA
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHEE
GIRIKGLEEEWALSIQRSEAQGPFCDAETGLLLRLSTSLSANALLAETLASSSAVAALET
CCEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHH
FNLSDKAVVMLNRLGEVVRTTVAADKMFDDDLRIRDKRLVSACRQSATRLERAIGRACTH
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQECFNNPVLLKRWNSTPVVAFVSPARGVARDIFSPCQTYVILVDPYERGTPAAAVLQEL
HHHHCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHH
FGLTRTEAALAGRLSRGEALRDIARVMAMSYETARTHLRSVFAKTGLNDQADLVAFLLRL
HCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DTGMN
HCCCC
>Mature Secondary Structure
MVCTAWNIDGLAEIFSDAALGRQTWRHALDALSEGIGATGAAFIPLKGAAAQLPTSSSCV
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHCCCCCHHHH
ELVDQYLKDGWSKADPRFRGVSMLYREGLVTDLDCLTVEEITRDPFYQELLRPFGLKWFA
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHEE
GIRIKGLEEEWALSIQRSEAQGPFCDAETGLLLRLSTSLSANALLAETLASSSAVAALET
CCEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHH
FNLSDKAVVMLNRLGEVVRTTVAADKMFDDDLRIRDKRLVSACRQSATRLERAIGRACTH
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQECFNNPVLLKRWNSTPVVAFVSPARGVARDIFSPCQTYVILVDPYERGTPAAAVLQEL
HHHHCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCEEEEEECCCCCCCCHHHHHHHH
FGLTRTEAALAGRLSRGEALRDIARVMAMSYETARTHLRSVFAKTGLNDQADLVAFLLRL
HCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DTGMN
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA