Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888828
Identifier: 15888828
GI number: 15888828
Start: 1492519
End: 1492746
Strand: Reverse
Name: 15888828
Synonym: Atu1503
Alternate gene names: NA
Gene position: 1492746-1492519 (Counterclockwise)
Preceding gene: 159184789
Following gene: 15888827
Centisome position: 52.53
GC content: 60.09
Gene sequence:
>228_bases ATGACTTTACCCCAACAGCAGAGCGGTGACCCGCAAAGGCGCAAGCCAATCTGGCCCTGGATCGTGCTTCTGGTTCTGAC GCTCTCGGCCATCTATTCCTATAATCGCGCCAGCGAGATCATTGCGGAATTCTCCGACACCCTGCCGCCGGCGCTTCTCA ACCTGTTCGAGGATATTCTCCGGGGAGACGGCCGGCACGGCAATGGCGGACCGGGCATCGGCGTTTGA
Upstream 100 bases:
>100_bases CCGCTGCGCCCAATGTGGCAATATATTCCGCTTCCAGCAGAAAACCGCCTATGCGCCTGGAGGCGAACCGCGCGTGAAGG CCTGAACGGAAGGTGGTAGT
Downstream 100 bases:
>100_bases GGTGGGGACGTCATAGAGAGGCGCTGGCCTTTTGGCTGCCCTTCATCTTGCGTGACCATAAAAGAAAAAAGCCCCGCAAA CGGGCGGGGCAGGTTGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MTLPQQQSGDPQRRKPIWPWIVLLVLTLSAIYSYNRASEIIAEFSDTLPPALLNLFEDILRGDGRHGNGGPGIGV
Sequences:
>Translated_75_residues MTLPQQQSGDPQRRKPIWPWIVLLVLTLSAIYSYNRASEIIAEFSDTLPPALLNLFEDILRGDGRHGNGGPGIGV >Mature_74_residues TLPQQQSGDPQRRKPIWPWIVLLVLTLSAIYSYNRASEIIAEFSDTLPPALLNLFEDILRGDGRHGNGGPGIGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8272; Mature: 8140
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPQQQSGDPQRRKPIWPWIVLLVLTLSAIYSYNRASEIIAEFSDTLPPALLNLFEDIL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RGDGRHGNGGPGIGV HCCCCCCCCCCCCCC >Mature Secondary Structure TLPQQQSGDPQRRKPIWPWIVLLVLTLSAIYSYNRASEIIAEFSDTLPPALLNLFEDIL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RGDGRHGNGGPGIGV HCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA