Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888811
Identifier: 15888811
GI number: 15888811
Start: 1476480
End: 1476869
Strand: Reverse
Name: 15888811
Synonym: Atu1486
Alternate gene names: NA
Gene position: 1476869-1476480 (Counterclockwise)
Preceding gene: 159184776
Following gene: 159184775
Centisome position: 51.97
GC content: 61.03
Gene sequence:
>390_bases ATGCGTGCACATCATTTCGTTCTGGCCGGCGCCATGGCGCTCGCCTCCACCGCCGCCCTTGCCGAGCCCTATGCCGGTGG CGCCGTGGTAGAAAAGGCGACGGCCAAGGGCACTATCCTCACCGACGCCAAAGGCATGACGCTCTATACATTCGACAATG ACGGCGACGCCTCATCGGCCTGTTATGATGGCTGCGCGAAAAAATGGCCACCCCTCGCCGCCCTGAAAACCGACAAGGCG GATGGCGACTACAAACCGATCGCCCGCAAGGACGGCACGATGCAGTGGTCGCATGATGGAAAGCCGCTTTATCGCTGGCA GATGGACAAGAAGCCCGGAGACATTACAGGCGATGGCGTCGGCGGCGTTTGGCACGTTGCCAAGGAGTAA
Upstream 100 bases:
>100_bases TCGCATCAAAAAATCAGCGCGGCGGGAATAAATTCCGCTGACCGGTGTTTTATCCAATATCGGGCACGGTGTCCGATCCG TTTCCTCAAAGGACTATCTC
Downstream 100 bases:
>100_bases CTCCAATGCCGGACTTTCTGGACGAGATGACAAGTTGCATACCAGCGCTCCGACGTTATGCGAATGCACTGACGCATGAT CGCGACACGGCTGACGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Secreted Repeat-Containing Protein; Blue Copper Domain Protein; Signal Peptide Protein; Secreted Repeat Protein; Exported Lipoprotein; Secreted Protein; Exported Protein
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MRAHHFVLAGAMALASTAALAEPYAGGAVVEKATAKGTILTDAKGMTLYTFDNDGDASSACYDGCAKKWPPLAALKTDKA DGDYKPIARKDGTMQWSHDGKPLYRWQMDKKPGDITGDGVGGVWHVAKE
Sequences:
>Translated_129_residues MRAHHFVLAGAMALASTAALAEPYAGGAVVEKATAKGTILTDAKGMTLYTFDNDGDASSACYDGCAKKWPPLAALKTDKA DGDYKPIARKDGTMQWSHDGKPLYRWQMDKKPGDITGDGVGGVWHVAKE >Mature_129_residues MRAHHFVLAGAMALASTAALAEPYAGGAVVEKATAKGTILTDAKGMTLYTFDNDGDASSACYDGCAKKWPPLAALKTDKA DGDYKPIARKDGTMQWSHDGKPLYRWQMDKKPGDITGDGVGGVWHVAKE
Specific function: Unknown
COG id: COG4315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13702; Mature: 13702
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAHHFVLAGAMALASTAALAEPYAGGAVVEKATAKGTILTDAKGMTLYTFDNDGDASSA CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCCCHH CYDGCAKKWPPLAALKTDKADGDYKPIARKDGTMQWSHDGKPLYRWQMDKKPGDITGDGV HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCC GGVWHVAKE CCEEEEECC >Mature Secondary Structure MRAHHFVLAGAMALASTAALAEPYAGGAVVEKATAKGTILTDAKGMTLYTFDNDGDASSA CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCCCHH CYDGCAKKWPPLAALKTDKADGDYKPIARKDGTMQWSHDGKPLYRWQMDKKPGDITGDGV HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCC GGVWHVAKE CCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA