Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15888811

Identifier: 15888811

GI number: 15888811

Start: 1476480

End: 1476869

Strand: Reverse

Name: 15888811

Synonym: Atu1486

Alternate gene names: NA

Gene position: 1476869-1476480 (Counterclockwise)

Preceding gene: 159184776

Following gene: 159184775

Centisome position: 51.97

GC content: 61.03

Gene sequence:

>390_bases
ATGCGTGCACATCATTTCGTTCTGGCCGGCGCCATGGCGCTCGCCTCCACCGCCGCCCTTGCCGAGCCCTATGCCGGTGG
CGCCGTGGTAGAAAAGGCGACGGCCAAGGGCACTATCCTCACCGACGCCAAAGGCATGACGCTCTATACATTCGACAATG
ACGGCGACGCCTCATCGGCCTGTTATGATGGCTGCGCGAAAAAATGGCCACCCCTCGCCGCCCTGAAAACCGACAAGGCG
GATGGCGACTACAAACCGATCGCCCGCAAGGACGGCACGATGCAGTGGTCGCATGATGGAAAGCCGCTTTATCGCTGGCA
GATGGACAAGAAGCCCGGAGACATTACAGGCGATGGCGTCGGCGGCGTTTGGCACGTTGCCAAGGAGTAA

Upstream 100 bases:

>100_bases
TCGCATCAAAAAATCAGCGCGGCGGGAATAAATTCCGCTGACCGGTGTTTTATCCAATATCGGGCACGGTGTCCGATCCG
TTTCCTCAAAGGACTATCTC

Downstream 100 bases:

>100_bases
CTCCAATGCCGGACTTTCTGGACGAGATGACAAGTTGCATACCAGCGCTCCGACGTTATGCGAATGCACTGACGCATGAT
CGCGACACGGCTGACGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Secreted Repeat-Containing Protein; Blue Copper Domain Protein; Signal Peptide Protein; Secreted Repeat Protein; Exported Lipoprotein; Secreted Protein; Exported Protein

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MRAHHFVLAGAMALASTAALAEPYAGGAVVEKATAKGTILTDAKGMTLYTFDNDGDASSACYDGCAKKWPPLAALKTDKA
DGDYKPIARKDGTMQWSHDGKPLYRWQMDKKPGDITGDGVGGVWHVAKE

Sequences:

>Translated_129_residues
MRAHHFVLAGAMALASTAALAEPYAGGAVVEKATAKGTILTDAKGMTLYTFDNDGDASSACYDGCAKKWPPLAALKTDKA
DGDYKPIARKDGTMQWSHDGKPLYRWQMDKKPGDITGDGVGGVWHVAKE
>Mature_129_residues
MRAHHFVLAGAMALASTAALAEPYAGGAVVEKATAKGTILTDAKGMTLYTFDNDGDASSACYDGCAKKWPPLAALKTDKA
DGDYKPIARKDGTMQWSHDGKPLYRWQMDKKPGDITGDGVGGVWHVAKE

Specific function: Unknown

COG id: COG4315

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13702; Mature: 13702

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAHHFVLAGAMALASTAALAEPYAGGAVVEKATAKGTILTDAKGMTLYTFDNDGDASSA
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCCCHH
CYDGCAKKWPPLAALKTDKADGDYKPIARKDGTMQWSHDGKPLYRWQMDKKPGDITGDGV
HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCC
GGVWHVAKE
CCEEEEECC
>Mature Secondary Structure
MRAHHFVLAGAMALASTAALAEPYAGGAVVEKATAKGTILTDAKGMTLYTFDNDGDASSA
CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCCCHH
CYDGCAKKWPPLAALKTDKADGDYKPIARKDGTMQWSHDGKPLYRWQMDKKPGDITGDGV
HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCC
GGVWHVAKE
CCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA