Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888798

Identifier: 15888798

GI number: 15888798

Start: 1468232

End: 1468720

Strand: Direct

Name: 15888798

Synonym: Atu1474

Alternate gene names: NA

Gene position: 1468232-1468720 (Clockwise)

Preceding gene: 15888797

Following gene: 15888799

Centisome position: 51.67

GC content: 59.3

Gene sequence:

>489_bases
ATGACCACCACGCTGAAACGCCTTGGCATTCTTGTGCTGGCGTCTTTCGTGCTGATGTCTTTCAGGCTGGAACCGGAAGC
GACAAACACCGACCGGCTGCTTTATGATGTGCGCGGCGCGTTTGTCGCTGCACGCCCAGATGTAGCGCCGGCACTGATGC
AGTCCATCCATGCGCAGGTCCAGAATGCGATCAAGATAACGGCGCGTGGTGAGACCAGACCGCGTGTGGTGCTGACCATC
CGTCTTGCATCCGTCAAACGCGCGCCCTTCCTGTTTGGAGAGCGGGCATCAGCCAAGGTCATCGTCCGTGCCGCAGCCGT
AGCGACGGGCGAAGTCATCGCCGAGGCCAAATTCACCGCCACTGTCGTTAGCTTCGACAATCAGTCGATCGAACAGGAAC
TCGCCTATGGTGTTGCTGAACGGGTGATCCACGAATTCAGGCTGAACCGGCCCGGCCCGACGACGCTTGCAACGGCCCTG
TTTCCATAA

Upstream 100 bases:

>100_bases
CGCGCTCAACGTGCTGGAGTCGCTGAAGAGCGCTTCTTAACGCTTTTCTAACTCTAATCACGGAACATACGGCTACCTCA
CGTAAGGGGAGCCGCTGATC

Downstream 100 bases:

>100_bases
GCAGCAGGGAAGGCGGGAGGGGGACATCCACCCACTCCCATTTATCCTGGAAATCTCACGCTCTGAAAAATTGCACCTCG
ATGCAACGGAGTTCACATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTTTLKRLGILVLASFVLMSFRLEPEATNTDRLLYDVRGAFVAARPDVAPALMQSIHAQVQNAIKITARGETRPRVVLTI
RLASVKRAPFLFGERASAKVIVRAAAVATGEVIAEAKFTATVVSFDNQSIEQELAYGVAERVIHEFRLNRPGPTTLATAL
FP

Sequences:

>Translated_162_residues
MTTTLKRLGILVLASFVLMSFRLEPEATNTDRLLYDVRGAFVAARPDVAPALMQSIHAQVQNAIKITARGETRPRVVLTI
RLASVKRAPFLFGERASAKVIVRAAAVATGEVIAEAKFTATVVSFDNQSIEQELAYGVAERVIHEFRLNRPGPTTLATAL
FP
>Mature_161_residues
TTTLKRLGILVLASFVLMSFRLEPEATNTDRLLYDVRGAFVAARPDVAPALMQSIHAQVQNAIKITARGETRPRVVLTIR
LASVKRAPFLFGERASAKVIVRAAAVATGEVIAEAKFTATVVSFDNQSIEQELAYGVAERVIHEFRLNRPGPTTLATALF
P

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17662; Mature: 17531

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTLKRLGILVLASFVLMSFRLEPEATNTDRLLYDVRGAFVAARPDVAPALMQSIHAQV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCCEEEECCCCCHHHHHHHHHHH
QNAIKITARGETRPRVVLTIRLASVKRAPFLFGERASAKVIVRAAAVATGEVIAEAKFTA
HHHEEEEECCCCCCEEEEEEEECCCCCCCEEECCCCCHHEEEHHHHHHHHHHHHHHHHEE
TVVSFDNQSIEQELAYGVAERVIHEFRLNRPGPTTLATALFP
EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC
>Mature Secondary Structure 
TTTLKRLGILVLASFVLMSFRLEPEATNTDRLLYDVRGAFVAARPDVAPALMQSIHAQV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCCEEEECCCCCHHHHHHHHHHH
QNAIKITARGETRPRVVLTIRLASVKRAPFLFGERASAKVIVRAAAVATGEVIAEAKFTA
HHHEEEEECCCCCCEEEEEEEECCCCCCCEEECCCCCHHEEEHHHHHHHHHHHHHHHHEE
TVVSFDNQSIEQELAYGVAERVIHEFRLNRPGPTTLATALFP
EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA