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The map label for this gene is yurM [H]

Identifier: 15888728

GI number: 15888728

Start: 1396509

End: 1397342

Strand: Reverse

Name: yurM [H]

Synonym: Atu1402

Alternate gene names: 15888728

Gene position: 1397342-1396509 (Counterclockwise)

Preceding gene: 15888729

Following gene: 15888727

Centisome position: 49.17

GC content: 57.55

Gene sequence:

>834_bases
TTGATGAATACCACCGGCAACGCCCACTTTGTTCGCATCCTCGCCGTCCTCTTCATGCTCGGCTTTGCGGCTTTTCCGAT
CTACTGGATGTTCGTCACGTCCATGACGCCGTCATCGGAACTCTTCGCGCCCTTTCCACGGCTCGTGCCTGACTGGTCGC
AGCTTGGAATCTATCTCGAGGTTTTCGATACCATTCCGGTGACGACATGGCTGAAGAACAGCTTTCTGGTTGCCACAGGC
ACCACCGTCCTCAGCATCCTGCTGGCCGTCCTGCCGGCTTATGCCCTTTCCCGTTTCCGGTTTGCAGGACTTGCGATACT
CGGCTTTGCATTGTTTGCAACGCAGATGCTGCCGGAAGCCATGCTTGTCGTGCCGCTCTATTCGATATTTGGCGACCTCA
ACCTGCTTAATACGATCCCTGGCCTCGTGCTGGCAAACACCGCCTTCGTGGTACCTGTGATCACCTGGATCATAAAGGGT
GCGATCGACGGCATTCCGATCGAGATCGAAGAGGCGGCAAGGGTCGATGGCTGCTCGCGTCTCGATATTGTGCTCGGCAT
CATCATTCCGCTGATTGCGCCGACGCTCGCTGCCGCTGCCGTCATCTCTTTCTTCCACGGCTGGAACGAATATGTCTTCG
CGCAGACCCTGATCAGCAGTGAGAACCTCAGGACGGCTTCCGTCGGGCTCGCCAGTTTCGTGGGCGAACTCTCCACGCCC
ATCCATTCCGTCATGGCAGTGGGGGTGATCTACACCCTGCCCGCCATCGTCTTTTACCTCTTTGCCCAACGCTACGTGGT
CGCCGGAATGACCGCCGGCAGTGTCAAAGGCTGA

Upstream 100 bases:

>100_bases
CAGCGGCCTCCATCGGCATGATCGGCCTGTCGATCGCGCTTCTGGTAACCGTCATCTATTTCAAGGTCACCCGGATGACT
GAACAGGCACAGGGGAAGCG

Downstream 100 bases:

>100_bases
CAGGAAAACCAGATGCCCGCTATTGAACTCAACAATATCTCGAAGAAATTCGGTGCGAAGGAAGTCATTCGCGACATCAA
TGTCTCGATCGAAGAGGGAG

Product: ABC transporter, membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MMNTTGNAHFVRILAVLFMLGFAAFPIYWMFVTSMTPSSELFAPFPRLVPDWSQLGIYLEVFDTIPVTTWLKNSFLVATG
TTVLSILLAVLPAYALSRFRFAGLAILGFALFATQMLPEAMLVVPLYSIFGDLNLLNTIPGLVLANTAFVVPVITWIIKG
AIDGIPIEIEEAARVDGCSRLDIVLGIIIPLIAPTLAAAAVISFFHGWNEYVFAQTLISSENLRTASVGLASFVGELSTP
IHSVMAVGVIYTLPAIVFYLFAQRYVVAGMTAGSVKG

Sequences:

>Translated_277_residues
MMNTTGNAHFVRILAVLFMLGFAAFPIYWMFVTSMTPSSELFAPFPRLVPDWSQLGIYLEVFDTIPVTTWLKNSFLVATG
TTVLSILLAVLPAYALSRFRFAGLAILGFALFATQMLPEAMLVVPLYSIFGDLNLLNTIPGLVLANTAFVVPVITWIIKG
AIDGIPIEIEEAARVDGCSRLDIVLGIIIPLIAPTLAAAAVISFFHGWNEYVFAQTLISSENLRTASVGLASFVGELSTP
IHSVMAVGVIYTLPAIVFYLFAQRYVVAGMTAGSVKG
>Mature_277_residues
MMNTTGNAHFVRILAVLFMLGFAAFPIYWMFVTSMTPSSELFAPFPRLVPDWSQLGIYLEVFDTIPVTTWLKNSFLVATG
TTVLSILLAVLPAYALSRFRFAGLAILGFALFATQMLPEAMLVVPLYSIFGDLNLLNTIPGLVLANTAFVVPVITWIIKG
AIDGIPIEIEEAARVDGCSRLDIVLGIIIPLIAPTLAAAAVISFFHGWNEYVFAQTLISSENLRTASVGLASFVGELSTP
IHSVMAVGVIYTLPAIVFYLFAQRYVVAGMTAGSVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=258, Percent_Identity=33.7209302325581, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1790464, Length=218, Percent_Identity=33.0275229357798, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789860, Length=264, Percent_Identity=29.5454545454545, Blast_Score=98, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29933; Mature: 29933

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNTTGNAHFVRILAVLFMLGFAAFPIYWMFVTSMTPSSELFAPFPRLVPDWSQLGIYLE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCHHHHHHHHH
VFDTIPVTTWLKNSFLVATGTTVLSILLAVLPAYALSRFRFAGLAILGFALFATQMLPEA
HHHCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLVVPLYSIFGDLNLLNTIPGLVLANTAFVVPVITWIIKGAIDGIPIEIEEAARVDGCSR
HHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCHH
LDIVLGIIIPLIAPTLAAAAVISFFHGWNEYVFAQTLISSENLRTASVGLASFVGELSTP
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IHSVMAVGVIYTLPAIVFYLFAQRYVVAGMTAGSVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMNTTGNAHFVRILAVLFMLGFAAFPIYWMFVTSMTPSSELFAPFPRLVPDWSQLGIYLE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCHHHHHHHHH
VFDTIPVTTWLKNSFLVATGTTVLSILLAVLPAYALSRFRFAGLAILGFALFATQMLPEA
HHHCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLVVPLYSIFGDLNLLNTIPGLVLANTAFVVPVITWIIKGAIDGIPIEIEEAARVDGCSR
HHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCHH
LDIVLGIIIPLIAPTLAAAAVISFFHGWNEYVFAQTLISSENLRTASVGLASFVGELSTP
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IHSVMAVGVIYTLPAIVFYLFAQRYVVAGMTAGSVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]