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The map label for this gene is yecS [H]

Identifier: 15888716

GI number: 15888716

Start: 1383737

End: 1384396

Strand: Direct

Name: yecS [H]

Synonym: Atu1390

Alternate gene names: 15888716

Gene position: 1383737-1384396 (Clockwise)

Preceding gene: 15888715

Following gene: 15888717

Centisome position: 48.7

GC content: 58.64

Gene sequence:

>660_bases
ATGATCGAATTCTCCACCTGGGATATTCTCAGAAACCTGTTGCTCGCCACGCGCTGGACCGTTCTGCTGTCGCTCGTTTC
CTTTGCCGGCGGCGGTCTCGTGGCGCTGCTTCTGCTGTTCATGCGCATTTCCCGCAAAAAATCGATGCGGGTTTTCGCGC
GCTATTATGTCGAGCTTTTCCAGGGAACGCCGCTTTTGATGCAGCTTTTCATCGCCTTTTTCGGCCTCGGCCTCGTCGGC
ATCGATGTGCCGGCCTGGCTGGCGGCGGGCCTGACGCTGATCCTGTGGGCGGCTGCCTTTCTTACCGAAATCTGGCGCGG
CTGTGTCGAATCCGTCGCGAAAGGCCAATGGGAGGCGTCGGCAAGCCTTGCCATGGGACGCCTGCAACAGATGCGCTACG
TCATCCTGCCGCAGGCTATGCGGGTGGCCATTCCGCCGACCGTCGGGTTTTTCGTACAGGTTATCAAGGGAACGGCTGTA
ACGTCGATCATCGGCTTCGTGGAACTGTCCAAGGCTGGCACGGTCGTCACCAACGCCACCTTCCAGCCCTTCACTGTTTA
TGGCCTCGTCGCCCTCATCTATTTCGCGCTGTGCTGGCCTCTGTCGAAGAGCAGCCAGATCCTCGAAAGGAAGCTCAATG
TCGCTCATCGAAATCACTGA

Upstream 100 bases:

>100_bases
CCTACATGGTCTCCACCGTCATCTATCTTGTGCTGGCCATTCTCTTGAGGCAGTTGCTGGTCATGGGCGGCAACCTCATT
TTTCCGCGCAGGAGTGTCCG

Downstream 100 bases:

>100_bases
AGTCCGCAAAAGCTATGGCAGCAACGAGGTTCTGAAAGGCATCAACCTTGATGTGGAGCCCGGCGAGGTCATCGCCATCA
TCGGCAAGAGCGGCTCTGGA

Product: ABC transporter, membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MIEFSTWDILRNLLLATRWTVLLSLVSFAGGGLVALLLLFMRISRKKSMRVFARYYVELFQGTPLLMQLFIAFFGLGLVG
IDVPAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEASASLAMGRLQQMRYVILPQAMRVAIPPTVGFFVQVIKGTAV
TSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRNH

Sequences:

>Translated_219_residues
MIEFSTWDILRNLLLATRWTVLLSLVSFAGGGLVALLLLFMRISRKKSMRVFARYYVELFQGTPLLMQLFIAFFGLGLVG
IDVPAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEASASLAMGRLQQMRYVILPQAMRVAIPPTVGFFVQVIKGTAV
TSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRNH
>Mature_219_residues
MIEFSTWDILRNLLLATRWTVLLSLVSFAGGGLVALLLLFMRISRKKSMRVFARYYVELFQGTPLLMQLFIAFFGLGLVG
IDVPAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEASASLAMGRLQQMRYVILPQAMRVAIPPTVGFFVQVIKGTAV
TSIIGFVELSKAGTVVTNATFQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRNH

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=211, Percent_Identity=37.4407582938389, Blast_Score=133, Evalue=7e-33,
Organism=Escherichia coli, GI87082239, Length=209, Percent_Identity=31.5789473684211, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1787030, Length=212, Percent_Identity=29.7169811320755, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1788645, Length=195, Percent_Identity=30.2564102564103, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI48994930, Length=137, Percent_Identity=30.6569343065693, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788646, Length=187, Percent_Identity=26.2032085561497, Blast_Score=71, Evalue=4e-14,
Organism=Escherichia coli, GI1787086, Length=176, Percent_Identity=28.4090909090909, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1786874, Length=188, Percent_Identity=25, Blast_Score=67, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24333; Mature: 24333

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFSTWDILRNLLLATRWTVLLSLVSFAGGGLVALLLLFMRISRKKSMRVFARYYVELF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGTPLLMQLFIAFFGLGLVGIDVPAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ASLAMGRLQQMRYVILPQAMRVAIPPTVGFFVQVIKGTAVTSIIGFVELSKAGTVVTNAT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
FQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRNH
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEFSTWDILRNLLLATRWTVLLSLVSFAGGGLVALLLLFMRISRKKSMRVFARYYVELF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGTPLLMQLFIAFFGLGLVGIDVPAWLAAGLTLILWAAAFLTEIWRGCVESVAKGQWEAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
ASLAMGRLQQMRYVILPQAMRVAIPPTVGFFVQVIKGTAVTSIIGFVELSKAGTVVTNAT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
FQPFTVYGLVALIYFALCWPLSKSSQILERKLNVAHRNH
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]