Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888687
Identifier: 15888687
GI number: 15888687
Start: 1354491
End: 1354907
Strand: Reverse
Name: 15888687
Synonym: Atu1361
Alternate gene names: NA
Gene position: 1354907-1354491 (Counterclockwise)
Preceding gene: 159184732
Following gene: 159184730
Centisome position: 47.68
GC content: 52.52
Gene sequence:
>417_bases ATGCGGGGCGCGGAGCAGGCGATCTTGCCGTCAGCGACAGTGCAGACCGAGCATCCGTCCGTGAAATCGATGCAGGACGG ATTGTCTCGCACGAAGTCCTTCATGGTGGCGGAAGTCTCCAATGCTTTGTCTTCCGTCGCTGTTGCCTGGTGGGGAGAAC TGAAAATCGGTAGCAACAAAAAAACAACTGCAATGAGACGTGGCGCAGGAAACCCGTCTACGCGCGATGCCTTGACCATT CAGTCTCTCCCGAAGCGAAAGGATTGCAACCTTCATTGCCTCCCAGCATTGAAGGAGAGGATATGGCGTTTTGGTGGCGT CGTTGCGATCGACGCGTCTATCCTGTGGGGCGAAATGAATAAACCTTGTATCGCACTTAAAAAAATCGTCTTTTCCTGTT TCGCGTTCACACTATAA
Upstream 100 bases:
>100_bases CACAAAGGCTTAAAAACGCACAGCGAAAACAGCCTGAAAGCGTTATAAATGCCTCAGAGACTACCGTCTCGTACAGCTCA GCTCTTTCACCTGGCATTGA
Downstream 100 bases:
>100_bases GAACCACGGCAATATTAATTGTCCAAGAAACTGAAATGCCAAAAAATCTGAAGGGATGATCTCCATGATGGAAGATTTTA TCGGCACCTATGGCAACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MRGAEQAILPSATVQTEHPSVKSMQDGLSRTKSFMVAEVSNALSSVAVAWWGELKIGSNKKTTAMRRGAGNPSTRDALTI QSLPKRKDCNLHCLPALKERIWRFGGVVAIDASILWGEMNKPCIALKKIVFSCFAFTL
Sequences:
>Translated_138_residues MRGAEQAILPSATVQTEHPSVKSMQDGLSRTKSFMVAEVSNALSSVAVAWWGELKIGSNKKTTAMRRGAGNPSTRDALTI QSLPKRKDCNLHCLPALKERIWRFGGVVAIDASILWGEMNKPCIALKKIVFSCFAFTL >Mature_138_residues MRGAEQAILPSATVQTEHPSVKSMQDGLSRTKSFMVAEVSNALSSVAVAWWGELKIGSNKKTTAMRRGAGNPSTRDALTI QSLPKRKDCNLHCLPALKERIWRFGGVVAIDASILWGEMNKPCIALKKIVFSCFAFTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15078; Mature: 15078
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGAEQAILPSATVQTEHPSVKSMQDGLSRTKSFMVAEVSNALSSVAVAWWGELKIGSNK CCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC KTTAMRRGAGNPSTRDALTIQSLPKRKDCNLHCLPALKERIWRFGGVVAIDASILWGEMN CHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEECHHHHHHHHHHCCEEEEEEEEEECCCC KPCIALKKIVFSCFAFTL CHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRGAEQAILPSATVQTEHPSVKSMQDGLSRTKSFMVAEVSNALSSVAVAWWGELKIGSNK CCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC KTTAMRRGAGNPSTRDALTIQSLPKRKDCNLHCLPALKERIWRFGGVVAIDASILWGEMN CHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEECHHHHHHHHHHCCEEEEEEEEEECCCC KPCIALKKIVFSCFAFTL CHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA