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The map label for this gene is gumB [H]

Identifier: 15888569

GI number: 15888569

Start: 1227249

End: 1227821

Strand: Reverse

Name: gumB [H]

Synonym: Atu1238

Alternate gene names: 15888569

Gene position: 1227821-1227249 (Counterclockwise)

Preceding gene: 15888571

Following gene: 15888568

Centisome position: 43.21

GC content: 61.08

Gene sequence:

>573_bases
ATGCCGCTCGCCGGATCACGACATGTCACCGCACTGACGCTAGCCGTTTTAACGGCCCTTTCCGGTTGCGCGGCATATCA
ACCCGCACCGCGCTCATTTAATGAGGCTGCGCTGCAACCCTATCACGTCGATAGCGGCGACAGGCTGCGCATCAACGTTT
TCGAACAGGTCGGGCTGACCAATACCTATACCGTCGATCAGGCGGGTTACGTCGCCTTCCCGCTTGTCGGTCAGGTTCCC
GCCCGCGGCAAGACGCTGCCGCAGCTCGAAGCCGCGATCGCCGCCAAGCTCCGGCAGGGGTATCTGCGCGATCCCGACGT
GACCATCGAAATCGACCGTTACCGTCCTGTCTTCATCATGGGTGAAGTCGGTCGTCCCGGCCAATATTCCTATGTGCCGG
GCATGACCGTGCAAAACGCCATCGCCATTGCCGGCGGTTTTTCCCCGCGCGCCAACCAGGCGGATGTCGACATTACCCGC
AAGATCAATGCCGAGGTGATGACCGGCCGCATCGGGATCAGCGCGCCAATTCTGGCGGGCGATACCGTCTATGTACGCGA
ACGCTTCTTCTGA

Upstream 100 bases:

>100_bases
AATAAAGCCGATATTACCATCGCTCGCGCCTGATGTTTACCGGCCATTAACCCTAACAGAACGATAAGAATGGTCAAAGA
TCGACTCGGAGCCAGATGAG

Downstream 100 bases:

>100_bases
AAACGGAGCGGTGAACGTGTCGGATGACGGCCCTCCCCTGCGCATCATTCATTGTTTCCGCTCACCCGTGGGCGGCGTTT
TCCGCCATGTGCGCGATCTG

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MPLAGSRHVTALTLAVLTALSGCAAYQPAPRSFNEAALQPYHVDSGDRLRINVFEQVGLTNTYTVDQAGYVAFPLVGQVP
ARGKTLPQLEAAIAAKLRQGYLRDPDVTIEIDRYRPVFIMGEVGRPGQYSYVPGMTVQNAIAIAGGFSPRANQADVDITR
KINAEVMTGRIGISAPILAGDTVYVRERFF

Sequences:

>Translated_190_residues
MPLAGSRHVTALTLAVLTALSGCAAYQPAPRSFNEAALQPYHVDSGDRLRINVFEQVGLTNTYTVDQAGYVAFPLVGQVP
ARGKTLPQLEAAIAAKLRQGYLRDPDVTIEIDRYRPVFIMGEVGRPGQYSYVPGMTVQNAIAIAGGFSPRANQADVDITR
KINAEVMTGRIGISAPILAGDTVYVRERFF
>Mature_189_residues
PLAGSRHVTALTLAVLTALSGCAAYQPAPRSFNEAALQPYHVDSGDRLRINVFEQVGLTNTYTVDQAGYVAFPLVGQVPA
RGKTLPQLEAAIAAKLRQGYLRDPDVTIEIDRYRPVFIMGEVGRPGQYSYVPGMTVQNAIAIAGGFSPRANQADVDITRK
INAEVMTGRIGISAPILAGDTVYVRERFF

Specific function: Involved in succinoglycan (EPS I) synthesis. Needed for the addition of the first sugar (galactose) to the isoprenoid carrier [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 20540; Mature: 20409

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLAGSRHVTALTLAVLTALSGCAAYQPAPRSFNEAALQPYHVDSGDRLRINVFEQVGLT
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEECCCCCEEEEEEEHHCCCC
NTYTVDQAGYVAFPLVGQVPARGKTLPQLEAAIAAKLRQGYLRDPDVTIEIDRYRPVFIM
CEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEE
GEVGRPGQYSYVPGMTVQNAIAIAGGFSPRANQADVDITRKINAEVMTGRIGISAPILAG
ECCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEC
DTVYVRERFF
CEEEEEEECC
>Mature Secondary Structure 
PLAGSRHVTALTLAVLTALSGCAAYQPAPRSFNEAALQPYHVDSGDRLRINVFEQVGLT
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCEECCCCCEEEEEEEHHCCCC
NTYTVDQAGYVAFPLVGQVPARGKTLPQLEAAIAAKLRQGYLRDPDVTIEIDRYRPVFIM
CEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEE
GEVGRPGQYSYVPGMTVQNAIAIAGGFSPRANQADVDITRKINAEVMTGRIGISAPILAG
ECCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCCEEEC
DTVYVRERFF
CEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8439670; 11481431 [H]