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The map label for this gene is 15888498

Identifier: 15888498

GI number: 15888498

Start: 1155125

End: 1155583

Strand: Reverse

Name: 15888498

Synonym: Atu1160

Alternate gene names: NA

Gene position: 1155583-1155125 (Counterclockwise)

Preceding gene: 159184643

Following gene: 159184642

Centisome position: 40.67

GC content: 60.78

Gene sequence:

>459_bases
ATGAGCCTCGAACAGAACCCCACCTATGCCGCACCGGATGACTGGCGCGCCTATAGCGGCGTCCTGAGCCGGCGCATCTT
TGCGTTCCTGATCGATTACGCGATCGTTCTCCTGCTGTGCATCCCGGCCGCCGTGATTGTCTTCTTTCTCGGCGTGATTA
CCCTCGGCCTTGGCTGGTTCCTCTTCCCGGCGCTGTTCGTCATCGTCGCGGTGCTTTATTTCGGCGTTTCGCTGGGCGGT
CCCTCACAGGCCACACCCGGCATGCGGGCGATGGGGATTGCCATGGCGCGCATGGACGGACGGCGAATCGATTTCCTGTT
GGCGACCGTGCACATCGTGCTTTTCTGGGTCATCAACTCGGTTTTGACGCCTTTGATTCTTCTCGCAGGCCTGTTTACCG
AGCGCTCGCGCCTCGTTCACGACTTCCTGCTCGGCACCGTCATCGTCAGAACGCGCTGA

Upstream 100 bases:

>100_bases
TGAGGCCGGCGCTTATTGTATTCGGTCGTTTTCTTCCCATATTGTCTGCTGACACGGCGAATATGCCGCGCTGTCAGACC
CTCTCAGGAGAAAACGACCG

Downstream 100 bases:

>100_bases
TATCGGGGAAAGCCACGCAAACGTGGCTTTCTACCCGTCCAATAGCTCATCCCGCAGTTGACGTTTTCCGTCATTTTGCC
ATTCTGTGACATTATACATG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; RDD Domain Containing Protein; RDD Family; RDD Family Protein

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSLEQNPTYAAPDDWRAYSGVLSRRIFAFLIDYAIVLLLCIPAAVIVFFLGVITLGLGWFLFPALFVIVAVLYFGVSLGG
PSQATPGMRAMGIAMARMDGRRIDFLLATVHIVLFWVINSVLTPLILLAGLFTERSRLVHDFLLGTVIVRTR

Sequences:

>Translated_152_residues
MSLEQNPTYAAPDDWRAYSGVLSRRIFAFLIDYAIVLLLCIPAAVIVFFLGVITLGLGWFLFPALFVIVAVLYFGVSLGG
PSQATPGMRAMGIAMARMDGRRIDFLLATVHIVLFWVINSVLTPLILLAGLFTERSRLVHDFLLGTVIVRTR
>Mature_151_residues
SLEQNPTYAAPDDWRAYSGVLSRRIFAFLIDYAIVLLLCIPAAVIVFFLGVITLGLGWFLFPALFVIVAVLYFGVSLGGP
SQATPGMRAMGIAMARMDGRRIDFLLATVHIVLFWVINSVLTPLILLAGLFTERSRLVHDFLLGTVIVRTR

Specific function: Unknown

COG id: COG1714

COG function: function code S; Predicted membrane protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16802; Mature: 16671

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLEQNPTYAAPDDWRAYSGVLSRRIFAFLIDYAIVLLLCIPAAVIVFFLGVITLGLGWF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFPALFVIVAVLYFGVSLGGPSQATPGMRAMGIAMARMDGRRIDFLLATVHIVLFWVINS
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VLTPLILLAGLFTERSRLVHDFLLGTVIVRTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLEQNPTYAAPDDWRAYSGVLSRRIFAFLIDYAIVLLLCIPAAVIVFFLGVITLGLGWF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFPALFVIVAVLYFGVSLGGPSQATPGMRAMGIAMARMDGRRIDFLLATVHIVLFWVINS
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VLTPLILLAGLFTERSRLVHDFLLGTVIVRTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA