Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is yibF [C]
Identifier: 15888469
GI number: 15888469
Start: 1121377
End: 1121973
Strand: Reverse
Name: yibF [C]
Synonym: Atu1132
Alternate gene names: 15888469
Gene position: 1121973-1121377 (Counterclockwise)
Preceding gene: 159184629
Following gene: 159184628
Centisome position: 39.48
GC content: 60.3
Gene sequence:
>597_bases ATGGAACTGCTTTATTCGCCCGCCTCCCCCTACTCCGCCAAGGTGCGCATGGCCGCCCGCCATCTCGACATTGATGTCAC CTCCGTGCGCGTCGACACCAATGCCGAGCCGGCCACGCTGATGGACAACAATCCGCTCGGCAAAATCCCGGTCCTGCTGC TGGACGAAGGCGGCTCTGTCTATGACAGCGTGACGATCATGCATTATCTCGACCGTCTTTCGGGCGGCAAGCTTTACCCC AAGAAGAACGGCAAGCGCACTGAAGCGGAAATTCTGGAAGCTCTGTGCGACGGCATCATGGATTGCCTGCTCGCCATCGT CTACGAGCGGCGTTTCCGCCCGGAAGACAAGATTCATCAGCCGTGGATCGACAAGCAGTGGAGCAAGGTGGTCCGCGGGC TCGATCACCTCAACGCCAACCTGCCGAAAACCGGCAAGAAGCTGCATGGCGGCCATTTCGCCCTTGCAGCGATGATCGGC TATCTCGACCTGCGTTTTGCCGGTGAGTGGGCCGAGGGACGTGATGCGCTGGCAGCCTGGCCAGAAACCTTCGGCAAGCG TTTCGACGCCTATGCGGAAATGAAAGCCGCCGCCTAG
Upstream 100 bases:
>100_bases CGCGATTGCCCCGAACTGGACCGCAAGGGCTGCCGCGCCAGCGCGACCGAGATCATCCCCATACGCTGATTACCCCATAT CAACCCCATAGGACCCGACC
Downstream 100 bases:
>100_bases ACCCGCCGAACAAAACGCCCGGTTCTTTCCACCGGGCGTTAAGGCGATGGCAAATCACAGAAACAAAAAAAAGCCGGGGC GTAAACCCCGGCTTTTCCTT
Product: glutathione S-transferase related protein
Products: NA
Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Glutathione S-Transferase Related Protein; Glutathione Transferase; Glutathione S-Transferase N- Domain; Glutathione S-Transferase With Thioredoxin-Like Domain; Glutathione S-Transferase C-Terminal Domain-Containing; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase PARB
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MELLYSPASPYSAKVRMAARHLDIDVTSVRVDTNAEPATLMDNNPLGKIPVLLLDEGGSVYDSVTIMHYLDRLSGGKLYP KKNGKRTEAEILEALCDGIMDCLLAIVYERRFRPEDKIHQPWIDKQWSKVVRGLDHLNANLPKTGKKLHGGHFALAAMIG YLDLRFAGEWAEGRDALAAWPETFGKRFDAYAEMKAAA
Sequences:
>Translated_198_residues MELLYSPASPYSAKVRMAARHLDIDVTSVRVDTNAEPATLMDNNPLGKIPVLLLDEGGSVYDSVTIMHYLDRLSGGKLYP KKNGKRTEAEILEALCDGIMDCLLAIVYERRFRPEDKIHQPWIDKQWSKVVRGLDHLNANLPKTGKKLHGGHFALAAMIG YLDLRFAGEWAEGRDALAAWPETFGKRFDAYAEMKAAA >Mature_198_residues MELLYSPASPYSAKVRMAARHLDIDVTSVRVDTNAEPATLMDNNPLGKIPVLLLDEGGSVYDSVTIMHYLDRLSGGKLYP KKNGKRTEAEILEALCDGIMDCLLAIVYERRFRPEDKIHQPWIDKQWSKVVRGLDHLNANLPKTGKKLHGGHFALAAMIG YLDLRFAGEWAEGRDALAAWPETFGKRFDAYAEMKAAA
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790018, Length=149, Percent_Identity=32.2147651006711, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22116; Mature: 22116
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLYSPASPYSAKVRMAARHLDIDVTSVRVDTNAEPATLMDNNPLGKIPVLLLDEGGSV CCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCEEECCCCCCCCCEEEECCCCCH YDSVTIMHYLDRLSGGKLYPKKNGKRTEAEILEALCDGIMDCLLAIVYERRFRPEDKIHQ HHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PWIDKQWSKVVRGLDHLNANLPKTGKKLHGGHFALAAMIGYLDLRFAGEWAEGRDALAAW CCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH PETFGKRFDAYAEMKAAA HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MELLYSPASPYSAKVRMAARHLDIDVTSVRVDTNAEPATLMDNNPLGKIPVLLLDEGGSV CCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCEEECCCCCCCCCEEEECCCCCH YDSVTIMHYLDRLSGGKLYPKKNGKRTEAEILEALCDGIMDCLLAIVYERRFRPEDKIHQ HHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PWIDKQWSKVVRGLDHLNANLPKTGKKLHGGHFALAAMIGYLDLRFAGEWAEGRDALAAW CCCCHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH PETFGKRFDAYAEMKAAA HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA