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The map label for this gene is 15888330

Identifier: 15888330

GI number: 15888330

Start: 982150

End: 983040

Strand: Reverse

Name: 15888330

Synonym: Atu0987

Alternate gene names: NA

Gene position: 983040-982150 (Counterclockwise)

Preceding gene: 159184563

Following gene: 15888327

Centisome position: 34.59

GC content: 66.22

Gene sequence:

>891_bases
ATGATCGCCGCCCACGACCTTTCCCCGGCCGAACTTGCCGCCCTCCTGCATTTCCATGCGGATGCGGGCGTGGACTGGAT
GCTGGAGGAGGCGCCGGTCGACCGTTTCGCCGAATTTGCCGCCGCCCGCCCGATGCCGGGACAAGACGCTGCCACACCGG
CTAGGCAGGCGCAGAGCCCGGCCGACCGCCGTACTGATGCGCCTCAACGGCAGGCGCCAGGCCGGAGCGCGCCTGCGCGC
GGTGCACCGGCAGCCCCCGCCATTCAGCAAAATGTCGCCATGCCGGACGAGCAGGCCGTGTCGGCGGCGCGTTTTGCGGC
GGAAAGCGCGCGCTCGCTCGGCGAACTGAGAACCGCGCTTGAGGGTTTCAACGGCTGCAACCTCAAGAACAGCGCGCGCA
ATACGATTTTCAGCGAGGGCGACCCCGCCTCCGCCATCATGGTCATCGGCCCCATGCCTGACGCCGATGACGACCGCGAG
GGCACGCCCTTTGCCGGCAAGACGGGGCAGCTGCTCGAGCGCATGCTGGCGGCCATCGGCCTGGAGCGCAGCGCCATCAT
GATCGGCAATGTCGTGCCGTGGCGGCCGCCGGGTAATCGTCCGCCGACTCAGGCCGAGATGGATATCTGCCGCCCGTTCA
TCGAGCGCCAGATCGCACTGGCAGAGCCGAAACACCTGTTGCTTCTCGGCAACTTCACCGCACGTTTCTTCTTTGGCGGC
ACCGGCACCATCCATACGCTGCGCGGACAGTGGCGTGATGTCGCAGCCGGACACCTGATTCTGCCGGCGCTCGCAAGCCT
GCACCCACAGGAACTGCTGAACGCGCCAGCCAGCAAGTCCTTGGCCTGGCAGGATTTATTGGCTTTTCAGACAAAGATCA
CTGAAGGCTGA

Upstream 100 bases:

>100_bases
GCCCATGGTCTCGCCATGATCGGCGAAAGCGGCGATATTCAGCGCTGGACAGCGTGATTTACGGGTTCCCCGGGCGGGGA
ACATGGGGTAATTTCCACCC

Downstream 100 bases:

>100_bases
TTGCCTCATTCCTGATCAATGTAAATGAATTATGAAAAAAGCCATGCGCATTACGCATAACAGCGGCGCATTTGGCCGGC
TTGCCGAATCCATGCTGCGC

Product: DNA polymerase

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Glycosylase; Bacteriophage-Type DNA Polymerase; Uracil-DNA Glycosylase C-Terminal Domain Protein; DNA Polymerase-Related Protein; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; DNA Polymerase Bacteriophage-Type; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage Spo1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; DNA Polymerase Bacteriophage-Type Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Phage Related DNA Polymerase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; DNA Polymerase Related Protein; Uracil DNA Glycosylase Superfamily; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; Phage DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MIAAHDLSPAELAALLHFHADAGVDWMLEEAPVDRFAEFAAARPMPGQDAATPARQAQSPADRRTDAPQRQAPGRSAPAR
GAPAAPAIQQNVAMPDEQAVSAARFAAESARSLGELRTALEGFNGCNLKNSARNTIFSEGDPASAIMVIGPMPDADDDRE
GTPFAGKTGQLLERMLAAIGLERSAIMIGNVVPWRPPGNRPPTQAEMDICRPFIERQIALAEPKHLLLLGNFTARFFFGG
TGTIHTLRGQWRDVAAGHLILPALASLHPQELLNAPASKSLAWQDLLAFQTKITEG

Sequences:

>Translated_296_residues
MIAAHDLSPAELAALLHFHADAGVDWMLEEAPVDRFAEFAAARPMPGQDAATPARQAQSPADRRTDAPQRQAPGRSAPAR
GAPAAPAIQQNVAMPDEQAVSAARFAAESARSLGELRTALEGFNGCNLKNSARNTIFSEGDPASAIMVIGPMPDADDDRE
GTPFAGKTGQLLERMLAAIGLERSAIMIGNVVPWRPPGNRPPTQAEMDICRPFIERQIALAEPKHLLLLGNFTARFFFGG
TGTIHTLRGQWRDVAAGHLILPALASLHPQELLNAPASKSLAWQDLLAFQTKITEG
>Mature_296_residues
MIAAHDLSPAELAALLHFHADAGVDWMLEEAPVDRFAEFAAARPMPGQDAATPARQAQSPADRRTDAPQRQAPGRSAPAR
GAPAAPAIQQNVAMPDEQAVSAARFAAESARSLGELRTALEGFNGCNLKNSARNTIFSEGDPASAIMVIGPMPDADDDRE
GTPFAGKTGQLLERMLAAIGLERSAIMIGNVVPWRPPGNRPPTQAEMDICRPFIERQIALAEPKHLLLLGNFTARFFFGG
TGTIHTLRGQWRDVAAGHLILPALASLHPQELLNAPASKSLAWQDLLAFQTKITEG

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 31625; Mature: 31625

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAAHDLSPAELAALLHFHADAGVDWMLEEAPVDRFAEFAAARPMPGQDAATPARQAQSP
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHCCC
ADRRTDAPQRQAPGRSAPARGAPAAPAIQQNVAMPDEQAVSAARFAAESARSLGELRTAL
HHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EGFNGCNLKNSARNTIFSEGDPASAIMVIGPMPDADDDREGTPFAGKTGQLLERMLAAIG
HCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
LERSAIMIGNVVPWRPPGNRPPTQAEMDICRPFIERQIALAEPKHLLLLGNFTARFFFGG
CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECC
TGTIHTLRGQWRDVAAGHLILPALASLHPQELLNAPASKSLAWQDLLAFQTKITEG
CCEEEECCCCHHHHHCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIAAHDLSPAELAALLHFHADAGVDWMLEEAPVDRFAEFAAARPMPGQDAATPARQAQSP
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHCCC
ADRRTDAPQRQAPGRSAPARGAPAAPAIQQNVAMPDEQAVSAARFAAESARSLGELRTAL
HHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EGFNGCNLKNSARNTIFSEGDPASAIMVIGPMPDADDDREGTPFAGKTGQLLERMLAAIG
HCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
LERSAIMIGNVVPWRPPGNRPPTQAEMDICRPFIERQIALAEPKHLLLLGNFTARFFFGG
CCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECC
TGTIHTLRGQWRDVAAGHLILPALASLHPQELLNAPASKSLAWQDLLAFQTKITEG
CCEEEECCCCHHHHHCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA