Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is rimJ [H]
Identifier: 15888128
GI number: 15888128
Start: 782506
End: 783105
Strand: Reverse
Name: rimJ [H]
Synonym: Atu0785
Alternate gene names: 15888128
Gene position: 783105-782506 (Counterclockwise)
Preceding gene: 159184464
Following gene: 15888127
Centisome position: 27.56
GC content: 56.33
Gene sequence:
>600_bases ATGCTGCGTTTTCTTTCCCGACATAACGACACGCCGGAACTGCGCAGCGCCGATCATCTCCTCAGACTGCCGCGTTACAG CGATTTCAAGCAATGGCATGTGCTACGCTCGGAAAGCCGGCAGTTTCTTCAGCCCTGGGAGCCGACCTGGCGCCCGGATG AGCTGACCGAAGGCGCCTTCCGCATGCGCGTGGTGCGCAACGGCCAGGAATTTTCCTCCGGCACCGCCGTCTCGTTTCTG CTGTTCGAAAAAGAAACCCTGCTCGTCGGCGGCATCACCATCGGTTACATCCGCCGGGGCGCCGCACAAAGCTGCATGAT CGGCTACTGGACAGGCGAACGGCACGCGGCACGAGGCCATATGTCTGCCGCATTAAAATTGGTAATACCCTACATCTTTA ACGGACTTCAGTTGCACCGTATCGAGGCAGCCTGTATTCCGGAAAACTTCAAAAGCATCCGGCTTCTCGAAAATGCCGGG TTCCAGCGGGAAGGCCTCTTGCGGGAATATCTGAAAATCAATGGCCAATGGCGGGATCATATGATGTTTTCCCTTCTTGC CGACAAGCAAAGCTCCGGCGGAACGAAGTACGATACATGA
Upstream 100 bases:
>100_bases CGGATAAACCACTATGAGAGCGGGACTTAAAGGCGAAGACCGCTCATCTTTTTCGCCGTCCCGCTTGCGGATGGCGATAT CTGCCGCCCAGGGATCGTGA
Downstream 100 bases:
>100_bases CCTACAATCACACTGCGCCGTGCCTGTCGAAACGTCTGGCGGCAATCGCACTGGCTGTGCCGTTTTTCCTTCTTTTCGTG CTTTTTGCCTCTCATTCCTA
Product: ribosomal-protein (S5)-alanine N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MLRFLSRHNDTPELRSADHLLRLPRYSDFKQWHVLRSESRQFLQPWEPTWRPDELTEGAFRMRVVRNGQEFSSGTAVSFL LFEKETLLVGGITIGYIRRGAAQSCMIGYWTGERHAARGHMSAALKLVIPYIFNGLQLHRIEAACIPENFKSIRLLENAG FQREGLLREYLKINGQWRDHMMFSLLADKQSSGGTKYDT
Sequences:
>Translated_199_residues MLRFLSRHNDTPELRSADHLLRLPRYSDFKQWHVLRSESRQFLQPWEPTWRPDELTEGAFRMRVVRNGQEFSSGTAVSFL LFEKETLLVGGITIGYIRRGAAQSCMIGYWTGERHAARGHMSAALKLVIPYIFNGLQLHRIEAACIPENFKSIRLLENAG FQREGLLREYLKINGQWRDHMMFSLLADKQSSGGTKYDT >Mature_199_residues MLRFLSRHNDTPELRSADHLLRLPRYSDFKQWHVLRSESRQFLQPWEPTWRPDELTEGAFRMRVVRNGQEFSSGTAVSFL LFEKETLLVGGITIGYIRRGAAQSCMIGYWTGERHAARGHMSAALKLVIPYIFNGLQLHRIEAACIPENFKSIRLLENAG FQREGLLREYLKINGQWRDHMMFSLLADKQSSGGTKYDT
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S5 [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787305, Length=188, Percent_Identity=30.3191489361702, Blast_Score=97, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 23061; Mature: 23061
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRFLSRHNDTPELRSADHLLRLPRYSDFKQWHVLRSESRQFLQPWEPTWRPDELTEGAF CCCCCCCCCCCCCHHCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH RMRVVRNGQEFSSGTAVSFLLFEKETLLVGGITIGYIRRGAAQSCMIGYWTGERHAARGH HHHHHHCCCCCCCCCEEEEEEEECCEEEECCHHEEHHHCCCCCCEEEEEEECCCHHHHHH MSAALKLVIPYIFNGLQLHRIEAACIPENFKSIRLLENAGFQREGLLREYLKINGQWRDH HHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHEEHHHHCCCCHHHHHHHHHHCCCCCHHH MMFSLLADKQSSGGTKYDT HHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLRFLSRHNDTPELRSADHLLRLPRYSDFKQWHVLRSESRQFLQPWEPTWRPDELTEGAF CCCCCCCCCCCCCHHCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH RMRVVRNGQEFSSGTAVSFLLFEKETLLVGGITIGYIRRGAAQSCMIGYWTGERHAARGH HHHHHHCCCCCCCCCEEEEEEEECCEEEECCHHEEHHHCCCCCCEEEEEEECCCHHHHHH MSAALKLVIPYIFNGLQLHRIEAACIPENFKSIRLLENAGFQREGLLREYLKINGQWRDH HHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHEEHHHHCCCCHHHHHHHHHHCCCCCHHH MMFSLLADKQSSGGTKYDT HHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]