Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is coxC [H]
Identifier: 15888114
GI number: 15888114
Start: 767408
End: 768283
Strand: Direct
Name: coxC [H]
Synonym: Atu0771
Alternate gene names: 15888114
Gene position: 767408-768283 (Clockwise)
Preceding gene: 15888113
Following gene: 159184459
Centisome position: 27.01
GC content: 58.33
Gene sequence:
>876_bases ATGGCAGACACGCATCAGAAGAACCACGATTACCACATCATAGACCCGAGCCCGTGGCCGCTTCTGGCCTCCATCGGCGC CTTCATCATGACTTTCGGCGGCGTCTGCTACATGCGTTACCTGTCGGGCGGCTCCTTCAAGCTGTTCGGTGCGGAACTGG CCAACCCCTGGCTGTTCTATATCGGTCTCGTCATCGTGCTTTACGTCATGTACGCCTGGTGGGCGGACACGATCAAGGAA GCCAATGAGGGCAGCCATACCCGCGTGGTTTCGCTGCATCTGCGTTACGGCATGATCATGTTCATCGCCTCCGAGGTGAT GTTCTTTGTCGCCTGGTTCTGGGCCTATTTCGATGCCAGCCTCTTCCCGCATGAGGCCATTCAGGCGTCGCGCCTCGAAT ATACCGGCGGTCAATGGCCACCGAAGGGCATCGAGGTCATCGATCCCTGGCATCTGCCGCTCTACAACACCGTCATCCTG CTTCTCTCGGGCACCTGCGTCACCTGGGCGCACCATGCCCTGCTGCATAATGATCGCAAGGGCCTGATCTCGGGTCTGGC ATTGACCGTCGCGCTCGGCGTCCTGTTCTCCACCGTGCAGGTTTACGAATACATTCACGCACCATTCGACTTCAAGAATT CGATCTACGGCGCTACCTTCTTCATGGCCACCGGTTTCCACGGTTTCCATGTCTTCGTCGGCACTGTCTTCCTGCTGGTC TGCCTGTTCCGCGCCATCGCCGGCGGTTTCACACCCAAACAGCATTTCGGTTTCGAAGCGGCCGCCTGGTATTGGCACTT CGTTGACGTCGTCTGGCTGTTCCTGTTCTTCGCCATCTATATCTGGGGTGGCTGGGGCGCACCGCTGCACGGTTAA
Upstream 100 bases:
>100_bases TTGCCGGTAAAGACAGAATCTGGCGACAGCAAATTGTAAGAGGAGATCCGGGTCTTTTGAGGGGGCCGGATCAGGGAAGA GATAGCAGGGGATTGTCGCA
Downstream 100 bases:
>100_bases CTTACGCCGTGTAGCCCACCACGTTGCTTCTGAGATGAGCGAGCGCCACGTATTTCTTCTCCCCGCCGGGGAGAAGGTCG CGGCAGCGGGACGAGGCGGC
Product: cytochrome c oxidase subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MADTHQKNHDYHIIDPSPWPLLASIGAFIMTFGGVCYMRYLSGGSFKLFGAELANPWLFYIGLVIVLYVMYAWWADTIKE ANEGSHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLFPHEAIQASRLEYTGGQWPPKGIEVIDPWHLPLYNTVIL LLSGTCVTWAHHALLHNDRKGLISGLALTVALGVLFSTVQVYEYIHAPFDFKNSIYGATFFMATGFHGFHVFVGTVFLLV CLFRAIAGGFTPKQHFGFEAAAWYWHFVDVVWLFLFFAIYIWGGWGAPLHG
Sequences:
>Translated_291_residues MADTHQKNHDYHIIDPSPWPLLASIGAFIMTFGGVCYMRYLSGGSFKLFGAELANPWLFYIGLVIVLYVMYAWWADTIKE ANEGSHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLFPHEAIQASRLEYTGGQWPPKGIEVIDPWHLPLYNTVIL LLSGTCVTWAHHALLHNDRKGLISGLALTVALGVLFSTVQVYEYIHAPFDFKNSIYGATFFMATGFHGFHVFVGTVFLLV CLFRAIAGGFTPKQHFGFEAAAWYWHFVDVVWLFLFFAIYIWGGWGAPLHG >Mature_290_residues ADTHQKNHDYHIIDPSPWPLLASIGAFIMTFGGVCYMRYLSGGSFKLFGAELANPWLFYIGLVIVLYVMYAWWADTIKEA NEGSHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDASLFPHEAIQASRLEYTGGQWPPKGIEVIDPWHLPLYNTVILL LSGTCVTWAHHALLHNDRKGLISGLALTVALGVLFSTVQVYEYIHAPFDFKNSIYGATFFMATGFHGFHVFVGTVFLLVC LFRAIAGGFTPKQHFGFEAAAWYWHFVDVVWLFLFFAIYIWGGWGAPLHG
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=282, Percent_Identity=45.7446808510638, Blast_Score=234, Evalue=7e-62, Organism=Escherichia coli, GI1786633, Length=141, Percent_Identity=31.2056737588652, Blast_Score=63, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6226542, Length=284, Percent_Identity=34.1549295774648, Blast_Score=168, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 33074; Mature: 32943
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTHQKNHDYHIIDPSPWPLLASIGAFIMTFGGVCYMRYLSGGSFKLFGAELANPWLFY CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCHHHHH IGLVIVLYVMYAWWADTIKEANEGSHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDAS HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC LFPHEAIQASRLEYTGGQWPPKGIEVIDPWHLPLYNTVILLLSGTCVTWAHHALLHNDRK CCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHH GLISGLALTVALGVLFSTVQVYEYIHAPFDFKNSIYGATFFMATGFHGFHVFVGTVFLLV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH CLFRAIAGGFTPKQHFGFEAAAWYWHFVDVVWLFLFFAIYIWGGWGAPLHG HHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ADTHQKNHDYHIIDPSPWPLLASIGAFIMTFGGVCYMRYLSGGSFKLFGAELANPWLFY CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCHHHHH IGLVIVLYVMYAWWADTIKEANEGSHTRVVSLHLRYGMIMFIASEVMFFVAWFWAYFDAS HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC LFPHEAIQASRLEYTGGQWPPKGIEVIDPWHLPLYNTVILLLSGTCVTWAHHALLHNDRK CCCHHHHHHHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHH GLISGLALTVALGVLFSTVQVYEYIHAPFDFKNSIYGATFFMATGFHGFHVFVGTVFLLV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH CLFRAIAGGFTPKQHFGFEAAAWYWHFVDVVWLFLFFAIYIWGGWGAPLHG HHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]