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The map label for this gene is kdgA [H]

Identifier: 15888047

GI number: 15888047

Start: 703594

End: 704223

Strand: Reverse

Name: kdgA [H]

Synonym: Atu0703

Alternate gene names: 15888047

Gene position: 704223-703594 (Counterclockwise)

Preceding gene: 159184425

Following gene: 159184424

Centisome position: 24.78

GC content: 62.7

Gene sequence:

>630_bases
ATGCGTATTCCCTTCCCTTCCATCAAATATCCGCTGATCGCCATTCTGCGCGGTCTGAAACCCGAGGAAACCGAAGGCGT
CGTCGGCGCGCTGATCGAGACCGGCTTCCGCGCCATCGAAATTCCGCTCAACTCGCCCGATCCGTTCCGCTCGATCGAGA
TCGCCGCCAGGATGGCCCCGGCCGATTGCCTGATTGGCGCCGGCACCGTGCTCAGCGTGGAAGACGTGGCATCGCTGGAT
GCGGCAGGCGGCAAGCTGATGGTGAGCCCCAATGCCGATGCCGAGGTCATTACCGCCGCGCGTGAAAAAGGCATGGTAAC
GATGCCGGGTGTTCTCACCCCCACCGAAGCGCTGGTGGCCGCAAAGGCCGGAGCGACGGGGCTGAAGTTTTTCCCCGCCA
GCATCATCGGCCCTTCCGGCATCAATGCCATCAGGACGATCCTGCCGAAGGAGCTGATCATCGCCGCCGTCGGCGGTGTC
TCGGACAAGAATTTTTCCGACTATACCTCGGCCGGCATTCGGGCTTTCGGTCTCGGGACCAGCCTTTACAAGCCCGGCAT
GACGGCGGCGGAGGTGCGTGAACGCGCCACTGTCACACTCGCGGCCTATGATGCAGCCATCGGAGGATAA

Upstream 100 bases:

>100_bases
CCTTGATATCCACTATACGGTCATCGACGCCGACGACGCCGTGCGGCGCGGATTGCTGGCCGCTGCAAATGCCATCTGGC
CATAGGAAGAAAGATCGACC

Downstream 100 bases:

>100_bases
GAGCTTGGCGACCGTTTTTCCCTTTGCAGGACGTGTTCTGGACGAAACGCCGATGCTGCTTGGCGAAGGCCCGACCTTCG
ACCCCGCCAGCGGCACCGCC

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MRIPFPSIKYPLIAILRGLKPEETEGVVGALIETGFRAIEIPLNSPDPFRSIEIAARMAPADCLIGAGTVLSVEDVASLD
AAGGKLMVSPNADAEVITAAREKGMVTMPGVLTPTEALVAAKAGATGLKFFPASIIGPSGINAIRTILPKELIIAAVGGV
SDKNFSDYTSAGIRAFGLGTSLYKPGMTAAEVRERATVTLAAYDAAIGG

Sequences:

>Translated_209_residues
MRIPFPSIKYPLIAILRGLKPEETEGVVGALIETGFRAIEIPLNSPDPFRSIEIAARMAPADCLIGAGTVLSVEDVASLD
AAGGKLMVSPNADAEVITAAREKGMVTMPGVLTPTEALVAAKAGATGLKFFPASIIGPSGINAIRTILPKELIIAAVGGV
SDKNFSDYTSAGIRAFGLGTSLYKPGMTAAEVRERATVTLAAYDAAIGG
>Mature_209_residues
MRIPFPSIKYPLIAILRGLKPEETEGVVGALIETGFRAIEIPLNSPDPFRSIEIAARMAPADCLIGAGTVLSVEDVASLD
AAGGKLMVSPNADAEVITAAREKGMVTMPGVLTPTEALVAAKAGATGLKFFPASIIGPSGINAIRTILPKELIIAAVGGV
SDKNFSDYTSAGIRAFGLGTSLYKPGMTAAEVRERATVTLAAYDAAIGG

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=199, Percent_Identity=44.2211055276382, Blast_Score=158, Evalue=2e-40,
Organism=Escherichia coli, GI1788156, Length=141, Percent_Identity=30.4964539007092, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 21455; Mature: 21455

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00160 ALDOLASE_KDPG_KHG_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIPFPSIKYPLIAILRGLKPEETEGVVGALIETGFRAIEIPLNSPDPFRSIEIAARMAP
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCC
ADCLIGAGTVLSVEDVASLDAAGGKLMVSPNADAEVITAAREKGMVTMPGVLTPTEALVA
HHHEECCCCEEEHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEECCCCCCCHHHHHH
AKAGATGLKFFPASIIGPSGINAIRTILPKELIIAAVGGVSDKNFSDYTSAGIRAFGLGT
HCCCCCCCEECCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCC
SLYKPGMTAAEVRERATVTLAAYDAAIGG
HHCCCCCCHHHHHHHHEEEEEEECCCCCC
>Mature Secondary Structure
MRIPFPSIKYPLIAILRGLKPEETEGVVGALIETGFRAIEIPLNSPDPFRSIEIAARMAP
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCC
ADCLIGAGTVLSVEDVASLDAAGGKLMVSPNADAEVITAAREKGMVTMPGVLTPTEALVA
HHHEECCCCEEEHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEECCCCCCCHHHHHH
AKAGATGLKFFPASIIGPSGINAIRTILPKELIIAAVGGVSDKNFSDYTSAGIRAFGLGT
HCCCCCCCEECCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCEEEEECCC
SLYKPGMTAAEVRERATVTLAAYDAAIGG
HHCCCCCCHHHHHHHHEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]