Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is kefB [H]
Identifier: 15888035
GI number: 15888035
Start: 688740
End: 690572
Strand: Reverse
Name: kefB [H]
Synonym: Atu0692
Alternate gene names: 15888035
Gene position: 690572-688740 (Counterclockwise)
Preceding gene: 159184422
Following gene: 15888031
Centisome position: 24.3
GC content: 61.54
Gene sequence:
>1833_bases ATGACCGAGCACGACGCTCTCTTTTCCGAACCATTGCTGCTTCTGGCCGGCGCGGTCATCGCGGCCTCCGTTTTCCGCAA GCTAGGTCTTGGCACCGTGCTCGGTTATCTGGTGGCCGGCATCATCATCGGGCCGTTCCTGCATCTCGTCACGGATGCGA AGGACATCTTCAATGTCTCGGAACTCGGCGTGGTTTTCCTGCTCTTCATCATCGGGCTGGAACTGAAACCCTCGCGCATC TGGCAGATGCGGCGCGATATTTTGGGCCTCGGGCTGGCGCAGGTGCTGGTGACGGGTAGCGCGCTGGCGGCGATTGCCTG GTGGGCGGGGCTGATCGACGCGCGGGGAAGCGTGGTTGCGGGTTTCGGCCTTGCGCTTTCCTCCACCGCTTTTGCGCTGC AGATTCTGGAAGACGACGGCGACATGAATACGCGCCACGGCAACCGTTCCTTCTCGATCCTGCTGTTTCAGGATCTTGCC ATCGTGCCGCTTCTGGCGCTCGTGACCATTCTCTCCAACCGGCCGGATGTGCCGACGGATTCGATGGCTTACGATCTCGT CGCCTCGGTCGTTGCGGTGGCAGGCATGGTGCTGGCCGGACGCTTCCTGCTGACGCCGATGTTCCAGATCATCGCCCGCA CGGGTGCGCGCGAAGTGATGATCGCGGCCGCCCTTTTTGTCGTCATCGGCGCGGCCGCCATTATGGAGATGGTGGGCCTG TCGATGGGCATGGGTGCGCTGCTGGCAGGGCTGATGCTGTCGGAATCCTCTTACCGGCATGAGCTGGAGGCCGATATCGA GCCGTTTCGCGGGTTGTTCCTGGCGCTGTTCTTCATGGCCGTCGGCATGTCGCTGCATATCAATATCGTCTACGAGCACA TCGTCCTCATCCTCATCGCCGTGCCTGTCATGATGGCGGTGAAGGCGGCCCTGATCTATGGTCTTTGCCGCATTGCCGGT TCGTCGCGTTATGCGTCGAGCCGCATCGCGCTGCTTCTGGCGCAGGGCGGCGAATTCGGTTTCGTGCTTTTCACCACGGC CGCCGCGTCCGGCCTGTTTCCGCAGGCCACGGCCTCGATCCTCGTCGCCGTCGTCACGCTCTCCATGGCGCTGACGCCGG TTCTGGCAGTGATTTCGCGGCGGCTGACCGCGGAGGATGCGGAAGAGGACAAGCTGGAAGAGGATTTCGACGGGGCGGGT GCGGATGTGCTGATGATCGGCTTTTCCCGCTTCGGCCAGATCGCCTCGCAGATCCTTCTTGCTGGCGGCCGCGACGTGAC TGTCATCGACAGTTCGGCCGACCGTGTGCGTCAGGCCGCCCGTTTCGGGTTCCGCATCTTTTTCGGCGATGGCACCCGCA AGGATGTGCTGATCGCAGCCGGTATCGAACGCGCCGATCTGGTGGCGGTCTGCACCCACAAGAAGGAGGTCACCGACCGT ATCATCGACATGATCCAGTCGGAATTTCCAAGCGTGCGCATCTATGCCCGCTCCTATGACCGCATTCATTCCCTCGACCT CAGGAAAAAGGGCGTGGAATATGAAATCCGAGAGACGCTGGAATCCGGCCTGCTGTTCGGCAGGCGCATTCTGGAAGGGC TGGATATGGACGCTGAAAGGGCACTTGCCATTTCCGACGACATCCGCGAACGCGACGAACAGCGACTGGAGCTTCAGGCC GTCGAAGGCCTCGCGGCCGGACGGCAGATGCTGCACAACAAACCCGTGCGCGAAGTGAAGCCGGAACCGCTGATGAAGCC GAAGAACAAGGCGGAGAAGCGGGAGGAGGAAGAAGAGGATATGGAGGAAAGCGAGACGGAAGTTTTACTGTAG
Upstream 100 bases:
>100_bases CCTGTTCCATTTATTGTGCCAGCAACCCTGCATCAAGGGCGAAACGCCGCTTTCTCCATTCAGACGGCTCCATCGCCACC CTATTTGAAAGTCCGCCCGC
Downstream 100 bases:
>100_bases TGTCAAATAAGCGGCCCCCGCTCGGCTTCCTATTCAGGGTGTAACGCTCAAGCCTCCACGCCCTGCCCGCGGTGAAACAA CTCCACCTGCATCTCGATCT
Product: glutathione-regulated potassium-efflux system protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MTEHDALFSEPLLLLAGAVIAASVFRKLGLGTVLGYLVAGIIIGPFLHLVTDAKDIFNVSELGVVFLLFIIGLELKPSRI WQMRRDILGLGLAQVLVTGSALAAIAWWAGLIDARGSVVAGFGLALSSTAFALQILEDDGDMNTRHGNRSFSILLFQDLA IVPLLALVTILSNRPDVPTDSMAYDLVASVVAVAGMVLAGRFLLTPMFQIIARTGAREVMIAAALFVVIGAAAIMEMVGL SMGMGALLAGLMLSESSYRHELEADIEPFRGLFLALFFMAVGMSLHINIVYEHIVLILIAVPVMMAVKAALIYGLCRIAG SSRYASSRIALLLAQGGEFGFVLFTTAAASGLFPQATASILVAVVTLSMALTPVLAVISRRLTAEDAEEDKLEEDFDGAG ADVLMIGFSRFGQIASQILLAGGRDVTVIDSSADRVRQAARFGFRIFFGDGTRKDVLIAAGIERADLVAVCTHKKEVTDR IIDMIQSEFPSVRIYARSYDRIHSLDLRKKGVEYEIRETLESGLLFGRRILEGLDMDAERALAISDDIRERDEQRLELQA VEGLAAGRQMLHNKPVREVKPEPLMKPKNKAEKREEEEEDMEESETEVLL
Sequences:
>Translated_610_residues MTEHDALFSEPLLLLAGAVIAASVFRKLGLGTVLGYLVAGIIIGPFLHLVTDAKDIFNVSELGVVFLLFIIGLELKPSRI WQMRRDILGLGLAQVLVTGSALAAIAWWAGLIDARGSVVAGFGLALSSTAFALQILEDDGDMNTRHGNRSFSILLFQDLA IVPLLALVTILSNRPDVPTDSMAYDLVASVVAVAGMVLAGRFLLTPMFQIIARTGAREVMIAAALFVVIGAAAIMEMVGL SMGMGALLAGLMLSESSYRHELEADIEPFRGLFLALFFMAVGMSLHINIVYEHIVLILIAVPVMMAVKAALIYGLCRIAG SSRYASSRIALLLAQGGEFGFVLFTTAAASGLFPQATASILVAVVTLSMALTPVLAVISRRLTAEDAEEDKLEEDFDGAG ADVLMIGFSRFGQIASQILLAGGRDVTVIDSSADRVRQAARFGFRIFFGDGTRKDVLIAAGIERADLVAVCTHKKEVTDR IIDMIQSEFPSVRIYARSYDRIHSLDLRKKGVEYEIRETLESGLLFGRRILEGLDMDAERALAISDDIRERDEQRLELQA VEGLAAGRQMLHNKPVREVKPEPLMKPKNKAEKREEEEEDMEESETEVLL >Mature_609_residues TEHDALFSEPLLLLAGAVIAASVFRKLGLGTVLGYLVAGIIIGPFLHLVTDAKDIFNVSELGVVFLLFIIGLELKPSRIW QMRRDILGLGLAQVLVTGSALAAIAWWAGLIDARGSVVAGFGLALSSTAFALQILEDDGDMNTRHGNRSFSILLFQDLAI VPLLALVTILSNRPDVPTDSMAYDLVASVVAVAGMVLAGRFLLTPMFQIIARTGAREVMIAAALFVVIGAAAIMEMVGLS MGMGALLAGLMLSESSYRHELEADIEPFRGLFLALFFMAVGMSLHINIVYEHIVLILIAVPVMMAVKAALIYGLCRIAGS SRYASSRIALLLAQGGEFGFVLFTTAAASGLFPQATASILVAVVTLSMALTPVLAVISRRLTAEDAEEDKLEEDFDGAGA DVLMIGFSRFGQIASQILLAGGRDVTVIDSSADRVRQAARFGFRIFFGDGTRKDVLIAAGIERADLVAVCTHKKEVTDRI IDMIQSEFPSVRIYARSYDRIHSLDLRKKGVEYEIRETLESGLLFGRRILEGLDMDAERALAISDDIRERDEQRLELQAV EGLAAGRQMLHNKPVREVKPEPLMKPKNKAEKREEEEEDMEESETEVLL
Specific function: Transport system that facilitate potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=388, Percent_Identity=26.2886597938144, Blast_Score=91, Evalue=4e-18, Organism=Escherichia coli, GI1789749, Length=557, Percent_Identity=41.2926391382406, Blast_Score=384, Evalue=1e-107, Organism=Escherichia coli, GI1786232, Length=563, Percent_Identity=39.4316163410302, Blast_Score=370, Evalue=1e-103, Organism=Escherichia coli, GI1786685, Length=500, Percent_Identity=28.6, Blast_Score=154, Evalue=1e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 66225; Mature: 66094
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEHDALFSEPLLLLAGAVIAASVFRKLGLGTVLGYLVAGIIIGPFLHLVTDAKDIFNVS CCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH ELGVVFLLFIIGLELKPSRIWQMRRDILGLGLAQVLVTGSALAAIAWWAGLIDARGSVVA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE GFGLALSSTAFALQILEDDGDMNTRHGNRSFSILLFQDLAIVPLLALVTILSNRPDVPTD HHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCH SMAYDLVASVVAVAGMVLAGRFLLTPMFQIIARTGAREVMIAAALFVVIGAAAIMEMVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SMGMGALLAGLMLSESSYRHELEADIEPFRGLFLALFFMAVGMSLHINIVYEHIVLILIA HCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHH VPVMMAVKAALIYGLCRIAGSSRYASSRIALLLAQGGEFGFVLFTTAAASGLFPQATASI HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEHHHHCCCCHHHHHHH LVAVVTLSMALTPVLAVISRRLTAEDAEEDKLEEDFDGAGADVLMIGFSRFGQIASQILL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHH AGGRDVTVIDSSADRVRQAARFGFRIFFGDGTRKDVLIAAGIERADLVAVCTHKKEVTDR CCCCEEEEECCCHHHHHHHHHCCEEEEECCCCCCCEEEEECCCHHHHHHHHHCHHHHHHH IIDMIQSEFPSVRIYARSYDRIHSLDLRKKGVEYEIRETLESGLLFGRRILEGLDMDAER HHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH ALAISDDIRERDEQRLELQAVEGLAAGRQMLHNKPVREVKPEPLMKPKNKAEKREEEEED HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHH MEESETEVLL HHHHHCCCCC >Mature Secondary Structure TEHDALFSEPLLLLAGAVIAASVFRKLGLGTVLGYLVAGIIIGPFLHLVTDAKDIFNVS CCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH ELGVVFLLFIIGLELKPSRIWQMRRDILGLGLAQVLVTGSALAAIAWWAGLIDARGSVVA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE GFGLALSSTAFALQILEDDGDMNTRHGNRSFSILLFQDLAIVPLLALVTILSNRPDVPTD HHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCH SMAYDLVASVVAVAGMVLAGRFLLTPMFQIIARTGAREVMIAAALFVVIGAAAIMEMVGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH SMGMGALLAGLMLSESSYRHELEADIEPFRGLFLALFFMAVGMSLHINIVYEHIVLILIA HCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHH VPVMMAVKAALIYGLCRIAGSSRYASSRIALLLAQGGEFGFVLFTTAAASGLFPQATASI HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEHHHHCCCCHHHHHHH LVAVVTLSMALTPVLAVISRRLTAEDAEEDKLEEDFDGAGADVLMIGFSRFGQIASQILL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHH AGGRDVTVIDSSADRVRQAARFGFRIFFGDGTRKDVLIAAGIERADLVAVCTHKKEVTDR CCCCEEEEECCCHHHHHHHHHCCEEEEECCCCCCCEEEEECCCHHHHHHHHHCHHHHHHH IIDMIQSEFPSVRIYARSYDRIHSLDLRKKGVEYEIRETLESGLLFGRRILEGLDMDAER HHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH ALAISDDIRERDEQRLELQAVEGLAAGRQMLHNKPVREVKPEPLMKPKNKAEKREEEEED HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHH MEESETEVLL HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]