Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15888027

Identifier: 15888027

GI number: 15888027

Start: 678704

End: 679552

Strand: Direct

Name: 15888027

Synonym: Atu0684

Alternate gene names: NA

Gene position: 678704-679552 (Clockwise)

Preceding gene: 15888022

Following gene: 15888028

Centisome position: 23.88

GC content: 63.25

Gene sequence:

>849_bases
ATGGCCCATCGCATTCTCACCCTCGGCGAAATCACTGATGGGTTCGACGTTGTTCTTTCGGATGTCTGGGGCGTGCTGCA
CAATGGCGTCAGCGCCTTTCCGGATGCGGCTGTTGCGCTGCATGAAGCGCGCAAGGCGGGCAAGACGGTGGTGCTCATCA
CCAATTCGCCGCGCCCGGCCCCCGGCGTCATCGCCCAGCTGCGTGTTCTCGGCGTGCCTGACGAGGCCTATGACCGTATC
ATCACCTCAGGTGATGTCACCCGCGGCCTGATCGCCGAAGGCCCGAAAAAAGTCTTCCTGCTCGGTCCCGAGCGGGACAT
GCCGCTGCTGGAAGGTCTCGATGTCGAGCGGGTCGGCGAGGCTGAGGCGCAATCCGTGGTCTGCACCGGCTTCTTTGATG
ACGAGACGGAAACGCCCGAAGATTATACGGAAATGCTGAAGGGCTTCATCGCCCGCAAGGTGCCGATGATCTGCGCCAAC
CCCGACCTGGTGGTGGAGCGCGGCGAGCGCATCATCCCCTGCGCCGGCGCAATGGCGGCCTATTACGAACAGCTGGGCGG
CGAAGTCCGCATTGCCGGCAAGCCGCATGCGCCGATCTATGAAGCCTGCCTTGCGGCGGCCAAAGACGTGCGCGGCGCCT
TCGCCAAGGATCGTGTGCTGGCCATCGGCGACGGCATGCCGACGGATGTGAAGGGTGCGATCGCGAGTGGCCTCAACCTT
CTTTATATCAGCGGCGGCATTCACGCCGCTGAATATACGCTGAACGGCCAGACGGACGAGGCGCTTCTGAATGCCTATCT
GAAGGGGCAGGGTGCTGCTCCCGGCTGGTGGATGCCCCGTCTTGCCTAA

Upstream 100 bases:

>100_bases
GGTAGGCCGCAGGCAGGCCTGGCACCGCTTTTTTCCTTGCCATCGGCGTCCCGCTTTGCGATGTGACGCACACTCTTTTT
TCGCACCCGGAAAGCACATC

Downstream 100 bases:

>100_bases
GAAAGTCTTGCCTAAGAACGTCTCGCCTAAGCTGGCGTAAAAATTGGATCGACTGCCATGACCGTCTTTCATCGCAATGA
AAAAAAAGAGCCGTTGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: HAD-Superfamily Subfamily IIA Hydrolase; HAD-Superfamily Hydrolase; HAD-Superfamily Hydrolase Subfamily IIA; HAD-Superfamily Subfamily IIA Hydrolase TIGR; HAD-Superfamily Subfamily IIA Hydrolase Like Protein; HAD Superfamily Hydrolase; Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Had-Superfamily Subfamily IIa Hydrolase Like Protein; Sugar Phosphatases Of HAD Superfamily; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase IIA; HAD Family Sugar Phosphatase; Sugar Phosphatase; HAD-Superfamily Subfamily IIA Hydrolase-Like Protein

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MAHRILTLGEITDGFDVVLSDVWGVLHNGVSAFPDAAVALHEARKAGKTVVLITNSPRPAPGVIAQLRVLGVPDEAYDRI
ITSGDVTRGLIAEGPKKVFLLGPERDMPLLEGLDVERVGEAEAQSVVCTGFFDDETETPEDYTEMLKGFIARKVPMICAN
PDLVVERGERIIPCAGAMAAYYEQLGGEVRIAGKPHAPIYEACLAAAKDVRGAFAKDRVLAIGDGMPTDVKGAIASGLNL
LYISGGIHAAEYTLNGQTDEALLNAYLKGQGAAPGWWMPRLA

Sequences:

>Translated_282_residues
MAHRILTLGEITDGFDVVLSDVWGVLHNGVSAFPDAAVALHEARKAGKTVVLITNSPRPAPGVIAQLRVLGVPDEAYDRI
ITSGDVTRGLIAEGPKKVFLLGPERDMPLLEGLDVERVGEAEAQSVVCTGFFDDETETPEDYTEMLKGFIARKVPMICAN
PDLVVERGERIIPCAGAMAAYYEQLGGEVRIAGKPHAPIYEACLAAAKDVRGAFAKDRVLAIGDGMPTDVKGAIASGLNL
LYISGGIHAAEYTLNGQTDEALLNAYLKGQGAAPGWWMPRLA
>Mature_281_residues
AHRILTLGEITDGFDVVLSDVWGVLHNGVSAFPDAAVALHEARKAGKTVVLITNSPRPAPGVIAQLRVLGVPDEAYDRII
TSGDVTRGLIAEGPKKVFLLGPERDMPLLEGLDVERVGEAEAQSVVCTGFFDDETETPEDYTEMLKGFIARKVPMICANP
DLVVERGERIIPCAGAMAAYYEQLGGEVRIAGKPHAPIYEACLAAAKDVRGAFAKDRVLAIGDGMPTDVKGAIASGLNLL
YISGGIHAAEYTLNGQTDEALLNAYLKGQGAAPGWWMPRLA

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29993; Mature: 29862

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHRILTLGEITDGFDVVLSDVWGVLHNGVSAFPDAAVALHEARKAGKTVVLITNSPRPA
CCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCEEEEEECCCCCC
PGVIAQLRVLGVPDEAYDRIITSGDVTRGLIAEGPKKVFLLGPERDMPLLEGLDVERVGE
CCHHHEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHCCCHHHCCC
AEAQSVVCTGFFDDETETPEDYTEMLKGFIARKVPMICANPDLVVERGERIIPCAGAMAA
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEECCCCEEECCHHHHHH
YYEQLGGEVRIAGKPHAPIYEACLAAAKDVRGAFAKDRVLAIGDGMPTDVKGAIASGLNL
HHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHCCCEE
LYISGGIHAAEYTLNGQTDEALLNAYLKGQGAAPGWWMPRLA
EEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AHRILTLGEITDGFDVVLSDVWGVLHNGVSAFPDAAVALHEARKAGKTVVLITNSPRPA
CCCEEEECCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCEEEEEECCCCCC
PGVIAQLRVLGVPDEAYDRIITSGDVTRGLIAEGPKKVFLLGPERDMPLLEGLDVERVGE
CCHHHEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHCCCHHHCCC
AEAQSVVCTGFFDDETETPEDYTEMLKGFIARKVPMICANPDLVVERGERIIPCAGAMAA
CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEECCCCEEECCHHHHHH
YYEQLGGEVRIAGKPHAPIYEACLAAAKDVRGAFAKDRVLAIGDGMPTDVKGAIASGLNL
HHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHCCCEE
LYISGGIHAAEYTLNGQTDEALLNAYLKGQGAAPGWWMPRLA
EEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA