Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888027
Identifier: 15888027
GI number: 15888027
Start: 678704
End: 679552
Strand: Direct
Name: 15888027
Synonym: Atu0684
Alternate gene names: NA
Gene position: 678704-679552 (Clockwise)
Preceding gene: 15888022
Following gene: 15888028
Centisome position: 23.88
GC content: 63.25
Gene sequence:
>849_bases ATGGCCCATCGCATTCTCACCCTCGGCGAAATCACTGATGGGTTCGACGTTGTTCTTTCGGATGTCTGGGGCGTGCTGCA CAATGGCGTCAGCGCCTTTCCGGATGCGGCTGTTGCGCTGCATGAAGCGCGCAAGGCGGGCAAGACGGTGGTGCTCATCA CCAATTCGCCGCGCCCGGCCCCCGGCGTCATCGCCCAGCTGCGTGTTCTCGGCGTGCCTGACGAGGCCTATGACCGTATC ATCACCTCAGGTGATGTCACCCGCGGCCTGATCGCCGAAGGCCCGAAAAAAGTCTTCCTGCTCGGTCCCGAGCGGGACAT GCCGCTGCTGGAAGGTCTCGATGTCGAGCGGGTCGGCGAGGCTGAGGCGCAATCCGTGGTCTGCACCGGCTTCTTTGATG ACGAGACGGAAACGCCCGAAGATTATACGGAAATGCTGAAGGGCTTCATCGCCCGCAAGGTGCCGATGATCTGCGCCAAC CCCGACCTGGTGGTGGAGCGCGGCGAGCGCATCATCCCCTGCGCCGGCGCAATGGCGGCCTATTACGAACAGCTGGGCGG CGAAGTCCGCATTGCCGGCAAGCCGCATGCGCCGATCTATGAAGCCTGCCTTGCGGCGGCCAAAGACGTGCGCGGCGCCT TCGCCAAGGATCGTGTGCTGGCCATCGGCGACGGCATGCCGACGGATGTGAAGGGTGCGATCGCGAGTGGCCTCAACCTT CTTTATATCAGCGGCGGCATTCACGCCGCTGAATATACGCTGAACGGCCAGACGGACGAGGCGCTTCTGAATGCCTATCT GAAGGGGCAGGGTGCTGCTCCCGGCTGGTGGATGCCCCGTCTTGCCTAA
Upstream 100 bases:
>100_bases GGTAGGCCGCAGGCAGGCCTGGCACCGCTTTTTTCCTTGCCATCGGCGTCCCGCTTTGCGATGTGACGCACACTCTTTTT TCGCACCCGGAAAGCACATC
Downstream 100 bases:
>100_bases GAAAGTCTTGCCTAAGAACGTCTCGCCTAAGCTGGCGTAAAAATTGGATCGACTGCCATGACCGTCTTTCATCGCAATGA AAAAAAAGAGCCGTTGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: HAD-Superfamily Subfamily IIA Hydrolase; HAD-Superfamily Hydrolase; HAD-Superfamily Hydrolase Subfamily IIA; HAD-Superfamily Subfamily IIA Hydrolase TIGR; HAD-Superfamily Subfamily IIA Hydrolase Like Protein; HAD Superfamily Hydrolase; Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Had-Superfamily Subfamily IIa Hydrolase Like Protein; Sugar Phosphatases Of HAD Superfamily; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase IIA; HAD Family Sugar Phosphatase; Sugar Phosphatase; HAD-Superfamily Subfamily IIA Hydrolase-Like Protein
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MAHRILTLGEITDGFDVVLSDVWGVLHNGVSAFPDAAVALHEARKAGKTVVLITNSPRPAPGVIAQLRVLGVPDEAYDRI ITSGDVTRGLIAEGPKKVFLLGPERDMPLLEGLDVERVGEAEAQSVVCTGFFDDETETPEDYTEMLKGFIARKVPMICAN PDLVVERGERIIPCAGAMAAYYEQLGGEVRIAGKPHAPIYEACLAAAKDVRGAFAKDRVLAIGDGMPTDVKGAIASGLNL LYISGGIHAAEYTLNGQTDEALLNAYLKGQGAAPGWWMPRLA
Sequences:
>Translated_282_residues MAHRILTLGEITDGFDVVLSDVWGVLHNGVSAFPDAAVALHEARKAGKTVVLITNSPRPAPGVIAQLRVLGVPDEAYDRI ITSGDVTRGLIAEGPKKVFLLGPERDMPLLEGLDVERVGEAEAQSVVCTGFFDDETETPEDYTEMLKGFIARKVPMICAN PDLVVERGERIIPCAGAMAAYYEQLGGEVRIAGKPHAPIYEACLAAAKDVRGAFAKDRVLAIGDGMPTDVKGAIASGLNL LYISGGIHAAEYTLNGQTDEALLNAYLKGQGAAPGWWMPRLA >Mature_281_residues AHRILTLGEITDGFDVVLSDVWGVLHNGVSAFPDAAVALHEARKAGKTVVLITNSPRPAPGVIAQLRVLGVPDEAYDRII TSGDVTRGLIAEGPKKVFLLGPERDMPLLEGLDVERVGEAEAQSVVCTGFFDDETETPEDYTEMLKGFIARKVPMICANP DLVVERGERIIPCAGAMAAYYEQLGGEVRIAGKPHAPIYEACLAAAKDVRGAFAKDRVLAIGDGMPTDVKGAIASGLNLL YISGGIHAAEYTLNGQTDEALLNAYLKGQGAAPGWWMPRLA
Specific function: Unknown
COG id: COG0647
COG function: function code G; Predicted sugar phosphatases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29993; Mature: 29862
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHRILTLGEITDGFDVVLSDVWGVLHNGVSAFPDAAVALHEARKAGKTVVLITNSPRPA CCCCEEEECCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCEEEEEECCCCCC PGVIAQLRVLGVPDEAYDRIITSGDVTRGLIAEGPKKVFLLGPERDMPLLEGLDVERVGE CCHHHEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHCCCHHHCCC AEAQSVVCTGFFDDETETPEDYTEMLKGFIARKVPMICANPDLVVERGERIIPCAGAMAA CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEECCCCEEECCHHHHHH YYEQLGGEVRIAGKPHAPIYEACLAAAKDVRGAFAKDRVLAIGDGMPTDVKGAIASGLNL HHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHCCCEE LYISGGIHAAEYTLNGQTDEALLNAYLKGQGAAPGWWMPRLA EEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AHRILTLGEITDGFDVVLSDVWGVLHNGVSAFPDAAVALHEARKAGKTVVLITNSPRPA CCCEEEECCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCEEEEEECCCCCC PGVIAQLRVLGVPDEAYDRIITSGDVTRGLIAEGPKKVFLLGPERDMPLLEGLDVERVGE CCHHHEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHCCCHHHCCC AEAQSVVCTGFFDDETETPEDYTEMLKGFIARKVPMICANPDLVVERGERIIPCAGAMAA CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCEECCCCEEECCHHHHHH YYEQLGGEVRIAGKPHAPIYEACLAAAKDVRGAFAKDRVLAIGDGMPTDVKGAIASGLNL HHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHCCCEE LYISGGIHAAEYTLNGQTDEALLNAYLKGQGAAPGWWMPRLA EEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA