Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is aroA [H]
Identifier: 15887983
GI number: 15887983
Start: 628400
End: 629677
Strand: Direct
Name: aroA [H]
Synonym: Atu0642
Alternate gene names: 15887983
Gene position: 628400-629677 (Clockwise)
Preceding gene: 15887982
Following gene: 159184402
Centisome position: 22.11
GC content: 63.07
Gene sequence:
>1278_bases ATGATCGAACTGACCATCACCCCGCCCGGCCACCCGCTTTCCGGCAAGGTGGAGCCGCCCGGCTCCAAATCCATCACCAA CCGCGCGCTTCTCTTGGCCGGCCTCGCCAAGGGCAAAAGCCACTTGTCAGGCGCCCTGAAAAGCGACGATACGCTTTATA TGGCCGAAGCTCTGCGGGAGATGGGCGTGAAGGTCACCGAGCCTGACGCCACCACCTTCGTGGTGGAGGGAACGGGCGTG CTGCAGCAGCCGGAAAAGCCGCTGTTCCTCGGCAATGCCGGCACCGCCACGCGGTTCCTGACTGCCGCCGGGGCACTTGT CGATGGCGCCGTCATCATCGATGGGGACGAACATATGCGCAAACGCCCGATACTGCCGCTGGTGCAGGCGCTGCGGGCTC TCGGCGTGGAAGCGGATGCGCCAACCGGCTGCCCGCCTGTCACCGTCCGTGGCAAGGGTATGGGTTTTCCAAAGGGCAGC GTCACCATCGACGCCAATCTCTCCAGCCAGTATGTGTCGGCACTGTTGATGGCCGCCGCCTGCGGTGACAAGCCCGTGGA TATCATCCTGAAGGGTGAGGAAATCGGCGCGAAGGGCTATATCGACCTCACCACATCCGCCATGGAAGCCTTCGGAGCGA AGGTGGAGCGGGTCAGCAACGCCATCTGGCGCGTGCATCCGACCGGTTACACGGCAACCGATTTCCACATCGAGCCGGAT GCCTCCGCCGCCACCTATCTCTGGGGCGCGGAGCTTCTGACCGGCGGTGCTATCGATATCGGCACGCCCGCTGACAAATT CACTCAGCCGGATGCCAAGGCTTATGAGGTCATGGCGCAGTTTCCGCATCTGCCCGCCGAAATCGACGGTTCGCAGATGC AGGACGCCATTCCAACCATCGCGGTTATCGCCGCCTTCAACGAGACGCCGGTGCGTTTCGTCGGCATCGCCAATCTGCGC GTCAAGGAATGCGACCGCATCCGCGCCGTCTCGCTCGGCCTCAACGAAATCCGCGAGGGTCTGGCGCATGAAGAGGGTGA CGACCTGATCGTACATGCCGATCCGTCGCTCGCCGGGCAGACGGTCGATGCCTCCATCGATACCTTTGCCGATCACCGCA TCGCCATGAGTTTTGCACTGGCGGCGCTCAAGATCGGAGGCATCGCCATCCAGAATCCCGCCTGCGTGGCCAAGACCTAT CCGGGCTACTGGAAAGCGCTTGCCTCGCTCGGCGTCGACTATACCGAAAAGGAAAGCGCTGCCGAGCCGCAGCACTGA
Upstream 100 bases:
>100_bases GCGCCGTGCCGACCGTGAAATTCTAAGCACCGGCTCCCAATCTCCCGCCGATATTCCGATAGCCCGGCTCCGTGCCGCAT TCTTTGACAAGACGACGATC
Downstream 100 bases:
>100_bases AGCCATTAGGGAGGGATCACCCGTGAAGACCATCGCCGCAAGACTTCTCGCGCTGTTCGTCTTCCTGGGCGTCGCCTTCC CGGCCTTTGCCGAGGAATTC
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MIELTITPPGHPLSGKVEPPGSKSITNRALLLAGLAKGKSHLSGALKSDDTLYMAEALREMGVKVTEPDATTFVVEGTGV LQQPEKPLFLGNAGTATRFLTAAGALVDGAVIIDGDEHMRKRPILPLVQALRALGVEADAPTGCPPVTVRGKGMGFPKGS VTIDANLSSQYVSALLMAAACGDKPVDIILKGEEIGAKGYIDLTTSAMEAFGAKVERVSNAIWRVHPTGYTATDFHIEPD ASAATYLWGAELLTGGAIDIGTPADKFTQPDAKAYEVMAQFPHLPAEIDGSQMQDAIPTIAVIAAFNETPVRFVGIANLR VKECDRIRAVSLGLNEIREGLAHEEGDDLIVHADPSLAGQTVDASIDTFADHRIAMSFALAALKIGGIAIQNPACVAKTY PGYWKALASLGVDYTEKESAAEPQH
Sequences:
>Translated_425_residues MIELTITPPGHPLSGKVEPPGSKSITNRALLLAGLAKGKSHLSGALKSDDTLYMAEALREMGVKVTEPDATTFVVEGTGV LQQPEKPLFLGNAGTATRFLTAAGALVDGAVIIDGDEHMRKRPILPLVQALRALGVEADAPTGCPPVTVRGKGMGFPKGS VTIDANLSSQYVSALLMAAACGDKPVDIILKGEEIGAKGYIDLTTSAMEAFGAKVERVSNAIWRVHPTGYTATDFHIEPD ASAATYLWGAELLTGGAIDIGTPADKFTQPDAKAYEVMAQFPHLPAEIDGSQMQDAIPTIAVIAAFNETPVRFVGIANLR VKECDRIRAVSLGLNEIREGLAHEEGDDLIVHADPSLAGQTVDASIDTFADHRIAMSFALAALKIGGIAIQNPACVAKTY PGYWKALASLGVDYTEKESAAEPQH >Mature_425_residues MIELTITPPGHPLSGKVEPPGSKSITNRALLLAGLAKGKSHLSGALKSDDTLYMAEALREMGVKVTEPDATTFVVEGTGV LQQPEKPLFLGNAGTATRFLTAAGALVDGAVIIDGDEHMRKRPILPLVQALRALGVEADAPTGCPPVTVRGKGMGFPKGS VTIDANLSSQYVSALLMAAACGDKPVDIILKGEEIGAKGYIDLTTSAMEAFGAKVERVSNAIWRVHPTGYTATDFHIEPD ASAATYLWGAELLTGGAIDIGTPADKFTQPDAKAYEVMAQFPHLPAEIDGSQMQDAIPTIAVIAAFNETPVRFVGIANLR VKECDRIRAVSLGLNEIREGLAHEEGDDLIVHADPSLAGQTVDASIDTFADHRIAMSFALAALKIGGIAIQNPACVAKTY PGYWKALASLGVDYTEKESAAEPQH
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=433, Percent_Identity=35.1039260969977, Blast_Score=186, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6320332, Length=454, Percent_Identity=35.0220264317181, Blast_Score=199, Evalue=5e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 44700; Mature: 44700
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELTITPPGHPLSGKVEPPGSKSITNRALLLAGLAKGKSHLSGALKSDDTLYMAEALRE CEEEEECCCCCCCCCCCCCCCCCCHHHHHHEEHHHHCCHHHHCCCCCCCCCHHHHHHHHH MGVKVTEPDATTFVVEGTGVLQQPEKPLFLGNAGTATRFLTAAGALVDGAVIIDGDEHMR CCCEEECCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCEEEECCHHHHH KRPILPLVQALRALGVEADAPTGCPPVTVRGKGMGFPKGSVTIDANLSSQYVSALLMAAA HCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHH CGDKPVDIILKGEEIGAKGYIDLTTSAMEAFGAKVERVSNAIWRVHPTGYTATDFHIEPD CCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCC ASAATYLWGAELLTGGAIDIGTPADKFTQPDAKAYEVMAQFPHLPAEIDGSQMQDAIPTI CCCEEEEEHHHHHCCCCEECCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCEE AVIAAFNETPVRFVGIANLRVKECDRIRAVSLGLNEIREGLAHEEGDDLIVHADPSLAGQ EEEEECCCCCEEEEEECCCCHHHCCHHHHHHCCHHHHHHHHCCCCCCCEEEECCCCCCCC TVDASIDTFADHRIAMSFALAALKIGGIAIQNPACVAKTYPGYWKALASLGVDYTEKESA EECCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEECCCCHHHHHHHHCCCCCCCCCCC AEPQH CCCCC >Mature Secondary Structure MIELTITPPGHPLSGKVEPPGSKSITNRALLLAGLAKGKSHLSGALKSDDTLYMAEALRE CEEEEECCCCCCCCCCCCCCCCCCHHHHHHEEHHHHCCHHHHCCCCCCCCCHHHHHHHHH MGVKVTEPDATTFVVEGTGVLQQPEKPLFLGNAGTATRFLTAAGALVDGAVIIDGDEHMR CCCEEECCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCEEEECCHHHHH KRPILPLVQALRALGVEADAPTGCPPVTVRGKGMGFPKGSVTIDANLSSQYVSALLMAAA HCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHH CGDKPVDIILKGEEIGAKGYIDLTTSAMEAFGAKVERVSNAIWRVHPTGYTATDFHIEPD CCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCC ASAATYLWGAELLTGGAIDIGTPADKFTQPDAKAYEVMAQFPHLPAEIDGSQMQDAIPTI CCCEEEEEHHHHHCCCCEECCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCEE AVIAAFNETPVRFVGIANLRVKECDRIRAVSLGLNEIREGLAHEEGDDLIVHADPSLAGQ EEEEECCCCCEEEEEECCCCHHHCCHHHHHHCCHHHHHHHHCCCCCCCEEEECCCCCCCC TVDASIDTFADHRIAMSFALAALKIGGIAIQNPACVAKTYPGYWKALASLGVDYTEKESA EECCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEECCCCHHHHHHHHCCCCCCCCCCC AEPQH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA