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The map label for this gene is fliP

Identifier: 15887892

GI number: 15887892

Start: 535780

End: 536517

Strand: Reverse

Name: fliP

Synonym: Atu0546

Alternate gene names: 15887892

Gene position: 536517-535780 (Counterclockwise)

Preceding gene: 15887893

Following gene: 15887891

Centisome position: 18.88

GC content: 57.18

Gene sequence:

>738_bases
ATGATTCGATTTCTTGTAACCATCGCCGTCCTCCTCGCTTTGCCGGGCCTTGCCAATGCCCAGCAATTTCCGTCCGATCT
GTTCAACACGCAGATCGACGGCTCCGTCGCGGCATGGATCATCCGCACCTTCGGCCTGTTGACGGTTCTCTCCGTCGCGC
CCGGCATCCTGATCATGGTCACGAGCTTTCCGCGCTTCGTGATCGCCTTTTCGATCCTGCGCTCCGGCATGGGACTTGCG
TCGACACCGTCGAACATGATCCTGCTGTCGATGGCGATGTTCATGACCTTTTACGTCATGTCCCCCACCTTCGACAAAGC
CTGGACGGATGGCGTGCAGCCGTTGCTGCAGAACCAGATCAACGAACAGCAGGCCGTGCAACGCATTGCCGAACCCTTCC
GCACCTTCATGAACGCCAATACGCGTGACAAGGACCTGAAGCTGTTCGTTGACATCGCCCGCGAGCGCGGACAGGTGGTC
ATGACCGACAATGTCGTGGACTATCGCGTACTGGTTCCTGCCTTCATGCTCTCGGAAATCCGGCGCGGTTTTGAAATTGG
TTTCCTCATCATCCTGCCGTTCCTCGTCATCGATCTGATCGTCGCCACCATTACCATGGCGATGGGCATGATGATGCTGC
CGCCCACCTCGATTTCGCTGCCGTTCAAGATCCTGTTTTTCGTGCTGATCGACGGCTGGAACCTGCTCGTGGGAAGCCTC
GTCAGATCGTTCAACTGA

Upstream 100 bases:

>100_bases
CGCGCGGCTTTCAATATCTTAAGGATGACATTCAGGAACGAGTTGACCTGCGCTCTCAAGGGCGCGTATCCAAGGTCATG
TTCCGGACCTTTGTCATCGA

Downstream 100 bases:

>100_bases
CGGCCCTTATACCCCGCTGATACAGATTAACCCTGTTTTTTAACCCCGCACGCCCAAGGCCGCGGGGTTTTCGCATTTTA
GTGCTTTGGTTACCATTTTC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MIRFLVTIAVLLALPGLANAQQFPSDLFNTQIDGSVAAWIIRTFGLLTVLSVAPGILIMVTSFPRFVIAFSILRSGMGLA
STPSNMILLSMAMFMTFYVMSPTFDKAWTDGVQPLLQNQINEQQAVQRIAEPFRTFMNANTRDKDLKLFVDIARERGQVV
MTDNVVDYRVLVPAFMLSEIRRGFEIGFLIILPFLVIDLIVATITMAMGMMMLPPTSISLPFKILFFVLIDGWNLLVGSL
VRSFN

Sequences:

>Translated_245_residues
MIRFLVTIAVLLALPGLANAQQFPSDLFNTQIDGSVAAWIIRTFGLLTVLSVAPGILIMVTSFPRFVIAFSILRSGMGLA
STPSNMILLSMAMFMTFYVMSPTFDKAWTDGVQPLLQNQINEQQAVQRIAEPFRTFMNANTRDKDLKLFVDIARERGQVV
MTDNVVDYRVLVPAFMLSEIRRGFEIGFLIILPFLVIDLIVATITMAMGMMMLPPTSISLPFKILFFVLIDGWNLLVGSL
VRSFN
>Mature_245_residues
MIRFLVTIAVLLALPGLANAQQFPSDLFNTQIDGSVAAWIIRTFGLLTVLSVAPGILIMVTSFPRFVIAFSILRSGMGLA
STPSNMILLSMAMFMTFYVMSPTFDKAWTDGVQPLLQNQINEQQAVQRIAEPFRTFMNANTRDKDLKLFVDIARERGQVV
MTDNVVDYRVLVPAFMLSEIRRGFEIGFLIILPFLVIDLIVATITMAMGMMMLPPTSISLPFKILFFVLIDGWNLLVGSL
VRSFN

Specific function: Plays a role in the flagellum-specific transport system

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family

Homologues:

Organism=Escherichia coli, GI1788259, Length=241, Percent_Identity=42.3236514522822, Blast_Score=201, Evalue=3e-53,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLIP_AGRT5 (Q44344)

Other databases:

- EMBL:   U39941
- EMBL:   U95165
- EMBL:   AE007869
- PIR:   AE2643
- PIR:   E97425
- RefSeq:   NP_353573.1
- STRING:   Q44344
- GeneID:   1132584
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu0546
- eggNOG:   COG1338
- HOGENOM:   HBG414116
- OMA:   MNANTRD
- PhylomeDB:   Q44344
- ProtClustDB:   PRK05699
- BioCyc:   ATUM176299-1:ATU0546-MONOMER
- InterPro:   IPR005837
- InterPro:   IPR005838
- PRINTS:   PR00951
- PRINTS:   PR01302
- TIGRFAMs:   TIGR01103

Pfam domain/function: PF00813 FliP

EC number: NA

Molecular weight: Translated: 27368; Mature: 27368

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS01060 FLIP_1; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd384510)-; HASH(0xcf48464)-; HASH(0xcde770c)-; HASH(0x404f6764)-; HASH(0xca31ce8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFLVTIAVLLALPGLANAQQFPSDLFNTQIDGSVAAWIIRTFGLLTVLSVAPGILIMV
CHHHHHHHHHHHHCCCCCCHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHH
TSFPRFVIAFSILRSGMGLASTPSNMILLSMAMFMTFYVMSPTFDKAWTDGVQPLLQNQI
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
NEQQAVQRIAEPFRTFMNANTRDKDLKLFVDIARERGQVVMTDNVVDYRVLVPAFMLSEI
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH
RRGFEIGFLIILPFLVIDLIVATITMAMGMMMLPPTSISLPFKILFFVLIDGWNLLVGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VRSFN
HHHCH
>Mature Secondary Structure
MIRFLVTIAVLLALPGLANAQQFPSDLFNTQIDGSVAAWIIRTFGLLTVLSVAPGILIMV
CHHHHHHHHHHHHCCCCCCHHHCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHH
TSFPRFVIAFSILRSGMGLASTPSNMILLSMAMFMTFYVMSPTFDKAWTDGVQPLLQNQI
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
NEQQAVQRIAEPFRTFMNANTRDKDLKLFVDIARERGQVVMTDNVVDYRVLVPAFMLSEI
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHH
RRGFEIGFLIILPFLVIDLIVATITMAMGMMMLPPTSISLPFKILFFVLIDGWNLLVGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VRSFN
HHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9161424; 11743193; 11743194