Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887863
Identifier: 15887863
GI number: 15887863
Start: 505736
End: 506035
Strand: Direct
Name: 15887863
Synonym: Atu0515
Alternate gene names: NA
Gene position: 505736-506035 (Clockwise)
Preceding gene: 159184351
Following gene: 15887864
Centisome position: 17.8
GC content: 57.0
Gene sequence:
>300_bases ATGGCAGCCAGAAAAGCAGCTGAGGCGACGCTGAAACTGTCACCGGTGCTGGATCTCAACGAAGCATCGGCTCTGCACGG CAAGCTGATGACGCTGAGAGGAGCACCTTTGTCGGTCGATGCGTCCGAGGTGGAGCGCATTGGCGCGCTTTGCGCCCAGG TCCTCATGGCCGGCGCGAAATCCTGGGAAGAGGATGGCAAGCCCTTCGGTTTCGCAAGGGTTTCCGATGCATTCGACAAG ACCATGAAACTGATAGGCGTCGATATCGACCATTTGCTCCCTAAGGAGATGCAAAAGTGA
Upstream 100 bases:
>100_bases CCGGTGCGGACTGGCAGCACTCATCATTTATGGCCCGTGGGGATAACCGCACGGATAACAGCCAGAATTACCAACAATTC AGACGTCAGGGAGTCATGTA
Downstream 100 bases:
>100_bases AGAAAAAAGTTCTTACCGTGGATGATTCCAGAACGATCAGGAACATGCTCCTGGTCACGCTCAACAATGCCGGTTTCGAA ACCATTCAGGCCGAAGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: Chemotaxis Protein CheX; Chemotaxis Related CheX Protein; CheX Protein
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MAARKAAEATLKLSPVLDLNEASALHGKLMTLRGAPLSVDASEVERIGALCAQVLMAGAKSWEEDGKPFGFARVSDAFDK TMKLIGVDIDHLLPKEMQK
Sequences:
>Translated_99_residues MAARKAAEATLKLSPVLDLNEASALHGKLMTLRGAPLSVDASEVERIGALCAQVLMAGAKSWEEDGKPFGFARVSDAFDK TMKLIGVDIDHLLPKEMQK >Mature_98_residues AARKAAEATLKLSPVLDLNEASALHGKLMTLRGAPLSVDASEVERIGALCAQVLMAGAKSWEEDGKPFGFARVSDAFDKT MKLIGVDIDHLLPKEMQK
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10623; Mature: 10491
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARKAAEATLKLSPVLDLNEASALHGKLMTLRGAPLSVDASEVERIGALCAQVLMAGAK CCCCHHHHHHEECCCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHH SWEEDGKPFGFARVSDAFDKTMKLIGVDIDHLLPKEMQK CHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHCC >Mature Secondary Structure AARKAAEATLKLSPVLDLNEASALHGKLMTLRGAPLSVDASEVERIGALCAQVLMAGAK CCCHHHHHHEECCCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHH SWEEDGKPFGFARVSDAFDKTMKLIGVDIDHLLPKEMQK CHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA