Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15887834

Identifier: 15887834

GI number: 15887834

Start: 475394

End: 475891

Strand: Reverse

Name: 15887834

Synonym: Atu8129

Alternate gene names: NA

Gene position: 475891-475394 (Counterclockwise)

Preceding gene: 159184335

Following gene: 159184332

Centisome position: 16.75

GC content: 62.85

Gene sequence:

>498_bases
ATGACCGATACATCACTTCAGACGCTCACCCGGCGCGGCTTCGTGCTTATTTCCGCCGGCTCCGTTCTTTCCGCCTGCGT
TTCCATGCCGACCAACAAGGGTCTGCCTTCGGGCACCCGCGATGAGACGGCAGCGGCACTGCCGATGGTCAATGATCTGC
GCCGTTCGAAGGGGCTTGCGCCACTCGCCATCAATGGGGCGGCCAGCGGTGCCGCTGCCTATCAGGCCGGCCGCATGGTC
AAGGCGCAGAAGATGGCGCATCTGATCGGCCTGACAGACAGTTTCCTCATCCGCATGAAGGACGGCAAGGTGCCGCTTCC
GGCAGCGGAAAACGTGGCAGCCGGACAGGACAGCGTGGAACGGGTGGTCAAGGCCTGGATCGGCTCGCAACACCATCTCG
AAAACATGCTCGGGCCTTATAATGGTCTCGGCGTCGCGGTTGCCTATGATGCCGCCAGCCGCAACCGGCCCTATTGGGCG
ATGGTGCTTTGCGCCTGA

Upstream 100 bases:

>100_bases
TTCCATGCGCTGGGCGCGATCGGCGACTATCTGCTCCTCGGGGCCACGATCGTCATTCCCGTTTTCATCATCCTGCGCCT
TCTGAGCTACCGCCGCTGAC

Downstream 100 bases:

>100_bases
ATTCAGGGGCGGGAGATCACCCCGCTCCTTCGCTCTTCAGCCGAGCTTACGGTCAGCCCAGCGGTCGACCGCGCTGTCGC
GCAGGTCACGGATGGTCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTDTSLQTLTRRGFVLISAGSVLSACVSMPTNKGLPSGTRDETAAALPMVNDLRRSKGLAPLAINGAASGAAAYQAGRMV
KAQKMAHLIGLTDSFLIRMKDGKVPLPAAENVAAGQDSVERVVKAWIGSQHHLENMLGPYNGLGVAVAYDAASRNRPYWA
MVLCA

Sequences:

>Translated_165_residues
MTDTSLQTLTRRGFVLISAGSVLSACVSMPTNKGLPSGTRDETAAALPMVNDLRRSKGLAPLAINGAASGAAAYQAGRMV
KAQKMAHLIGLTDSFLIRMKDGKVPLPAAENVAAGQDSVERVVKAWIGSQHHLENMLGPYNGLGVAVAYDAASRNRPYWA
MVLCA
>Mature_164_residues
TDTSLQTLTRRGFVLISAGSVLSACVSMPTNKGLPSGTRDETAAALPMVNDLRRSKGLAPLAINGAASGAAAYQAGRMVK
AQKMAHLIGLTDSFLIRMKDGKVPLPAAENVAAGQDSVERVVKAWIGSQHHLENMLGPYNGLGVAVAYDAASRNRPYWAM
VLCA

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17338; Mature: 17207

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTSLQTLTRRGFVLISAGSVLSACVSMPTNKGLPSGTRDETAAALPMVNDLRRSKGLA
CCCCHHHHHHHCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PLAINGAASGAAAYQAGRMVKAQKMAHLIGLTDSFLIRMKDGKVPLPAAENVAAGQDSVE
CEEECCCCCCHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
RVVKAWIGSQHHLENMLGPYNGLGVAVAYDAASRNRPYWAMVLCA
HHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEC
>Mature Secondary Structure 
TDTSLQTLTRRGFVLISAGSVLSACVSMPTNKGLPSGTRDETAAALPMVNDLRRSKGLA
CCCHHHHHHHCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PLAINGAASGAAAYQAGRMVKAQKMAHLIGLTDSFLIRMKDGKVPLPAAENVAAGQDSVE
CEEECCCCCCHHHHHHCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
RVVKAWIGSQHHLENMLGPYNGLGVAVAYDAASRNRPYWAMVLCA
HHHHHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA