Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is zraS [H]
Identifier: 15887737
GI number: 15887737
Start: 381014
End: 382489
Strand: Direct
Name: zraS [H]
Synonym: Atu0388
Alternate gene names: 15887737
Gene position: 381014-382489 (Clockwise)
Preceding gene: 159184286
Following gene: 15887738
Centisome position: 13.41
GC content: 61.72
Gene sequence:
>1476_bases GTGTTTTCTAAAGGCGTAGACAGCTTGGACCGCACGCAAGACGATCCGGTGCATTGCATGCCGGGATTGACCGCCGGCCT TTCCGGGCGGCTGCTGCTGCTGACCGTGATTTTCGTGATGATCGCCGAGGTGCTGATCTTCGTGCCATCGGTTGCCAATA TGCGTCTTTCCTGGCTGCGTGACCGTCTGAACACGGCCGCCGCTGCCGGTGCTGTCATCGATGGCCTGCAGGCCGAACTG CCGCGAAGCGTGCAGAACGACACGCTGATGGCAACCGGAGCGAAGCTAATCGCCCTGCGCAAGGATGGTACGTCGCGCCT GCTGGCCGTAGCGGAAACGCCGCCCGGCGTCGACGAGCAATATGATCTTTCCGATGTTTCGCAGGCGGCGGCGGTGCGGG ACGCCTTTTCCACCCTGCTGTTCGGCGGCAACCGCGTCATCCGCGTCTTCGATGTGGTGGGAGACAGCGACACGATCATC GAGCTCGTACTGGGCGAAAACAAGCTGCGGGCGGCGATGCTTGCCTATGCTCGCAACGTTTTCCTGATTTCCATCGTCCT GTCGCTGGTCACCGCGGGCCTGATCTTCATCTCCATCAACCGCATCATGATCCGGCCGATACGCCGGCTGACGCTCGGCA TGCAGAATTTTTCGGAAGATCCGGGCAATCCCGAGCGGATTTTCGTGCCGGAGGAGGGAACCGACGAACTGTCGGTTGCG GGCCGCCATCTCGCCGACATGCAGACGGAACTGCAGAAAACGCTGCGGCAGCAGAAGAACCTTGTGGATCTTGGCCTTGC CGTGTCGAAGATCAACCATGACATGCGCAATATCCTCTCCTCCGCCCAGCTCATGTCAGACCGTCTGGTCGATGCCAAGG ACCCGATGGTCAGGAGCTTCGCGCCGAAACTGCTGCGCACCATCGACCGTGCCGTGGCCTATACGGGTGAGGTTCTGGCC TATGGTCAGGCGACGGAGGGGGCGCCAAAACGCAAGATAGTGCCATTGAGCCTGCTGGTGCGGGATGTGCGCGATATTCT GGCCCTCGATCCCGATAGCGGCATCGAGTTTCACGACAGCGTCCCCCCCGATCTGACGGTGGATGCGGATTCCGAACAGC TTTTCCGGGTGATCCACAATCTCTGTCGCAATGCCGTCCAGGCCCTGCAATCCGACGTGGCGAATTCGGCACCAAGGCAT CTTTCCATCTCGGCCCAGAGGGCCGGCAGCGTCGTCAGCATCGTCATAGACGACAATGGGCCGGGAATGCCGCGCAAGGC CAAGGAGAACCTGTTCTCCGCTTTCAGGGGATCGGCCCGTTCCGGCGGCACGGGCCTCGGGCTGGTCATTGCCCGTGAAC TTGTGCTTGCCCACGGCGGTACGATCGCGCTTGTCGAAAAGCCCGGTCCCGGCACGCAGTTCCGTATCGAAATCGCCGAC CGCGCCGCCTCCATACAGGCAGCCAGAACCGCCTGA
Upstream 100 bases:
>100_bases CAGCGCATTGGAAAAATATCCATTAGGTCCTATTATCGTTGCTGCATATAAACCGAGCCGTTCCACGCAAGCAGCGGCGC GCATACAGGATCATGGCCCG
Downstream 100 bases:
>100_bases AAAACCCGCCCGGCTGCAGGTTCGGAAAGCCATTATCTCCGGCGGAATCAAGGCCCGATCAGGCCCGCGAAAAACAGCTT GGATGGAATTTACAATATAA
Product: two component sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MFSKGVDSLDRTQDDPVHCMPGLTAGLSGRLLLLTVIFVMIAEVLIFVPSVANMRLSWLRDRLNTAAAAGAVIDGLQAEL PRSVQNDTLMATGAKLIALRKDGTSRLLAVAETPPGVDEQYDLSDVSQAAAVRDAFSTLLFGGNRVIRVFDVVGDSDTII ELVLGENKLRAAMLAYARNVFLISIVLSLVTAGLIFISINRIMIRPIRRLTLGMQNFSEDPGNPERIFVPEEGTDELSVA GRHLADMQTELQKTLRQQKNLVDLGLAVSKINHDMRNILSSAQLMSDRLVDAKDPMVRSFAPKLLRTIDRAVAYTGEVLA YGQATEGAPKRKIVPLSLLVRDVRDILALDPDSGIEFHDSVPPDLTVDADSEQLFRVIHNLCRNAVQALQSDVANSAPRH LSISAQRAGSVVSIVIDDNGPGMPRKAKENLFSAFRGSARSGGTGLGLVIARELVLAHGGTIALVEKPGPGTQFRIEIAD RAASIQAARTA
Sequences:
>Translated_491_residues MFSKGVDSLDRTQDDPVHCMPGLTAGLSGRLLLLTVIFVMIAEVLIFVPSVANMRLSWLRDRLNTAAAAGAVIDGLQAEL PRSVQNDTLMATGAKLIALRKDGTSRLLAVAETPPGVDEQYDLSDVSQAAAVRDAFSTLLFGGNRVIRVFDVVGDSDTII ELVLGENKLRAAMLAYARNVFLISIVLSLVTAGLIFISINRIMIRPIRRLTLGMQNFSEDPGNPERIFVPEEGTDELSVA GRHLADMQTELQKTLRQQKNLVDLGLAVSKINHDMRNILSSAQLMSDRLVDAKDPMVRSFAPKLLRTIDRAVAYTGEVLA YGQATEGAPKRKIVPLSLLVRDVRDILALDPDSGIEFHDSVPPDLTVDADSEQLFRVIHNLCRNAVQALQSDVANSAPRH LSISAQRAGSVVSIVIDDNGPGMPRKAKENLFSAFRGSARSGGTGLGLVIARELVLAHGGTIALVEKPGPGTQFRIEIAD RAASIQAARTA >Mature_491_residues MFSKGVDSLDRTQDDPVHCMPGLTAGLSGRLLLLTVIFVMIAEVLIFVPSVANMRLSWLRDRLNTAAAAGAVIDGLQAEL PRSVQNDTLMATGAKLIALRKDGTSRLLAVAETPPGVDEQYDLSDVSQAAAVRDAFSTLLFGGNRVIRVFDVVGDSDTII ELVLGENKLRAAMLAYARNVFLISIVLSLVTAGLIFISINRIMIRPIRRLTLGMQNFSEDPGNPERIFVPEEGTDELSVA GRHLADMQTELQKTLRQQKNLVDLGLAVSKINHDMRNILSSAQLMSDRLVDAKDPMVRSFAPKLLRTIDRAVAYTGEVLA YGQATEGAPKRKIVPLSLLVRDVRDILALDPDSGIEFHDSVPPDLTVDADSEQLFRVIHNLCRNAVQALQSDVANSAPRH LSISAQRAGSVVSIVIDDNGPGMPRKAKENLFSAFRGSARSGGTGLGLVIARELVLAHGGTIALVEKPGPGTQFRIEIAD RAASIQAARTA
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=237, Percent_Identity=27.0042194092827, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790300, Length=227, Percent_Identity=30.3964757709251, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1786912, Length=278, Percent_Identity=26.6187050359712, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1788549, Length=235, Percent_Identity=27.2340425531915, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1789149, Length=194, Percent_Identity=28.3505154639175, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787894, Length=309, Percent_Identity=27.831715210356, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 52960; Mature: 52960
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSKGVDSLDRTQDDPVHCMPGLTAGLSGRLLLLTVIFVMIAEVLIFVPSVANMRLSWLR CCCCCCCHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH DRLNTAAAAGAVIDGLQAELPRSVQNDTLMATGAKLIALRKDGTSRLLAVAETPPGVDEQ HHHHHHHHHHHHHHHHHHHCCCHHCCCEEEECCCEEEEEECCCCCEEEEEECCCCCCCCC YDLSDVSQAAAVRDAFSTLLFGGNRVIRVFDVVGDSDTIIELVLGENKLRAAMLAYARNV CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHH FLISIVLSLVTAGLIFISINRIMIRPIRRLTLGMQNFSEDPGNPERIFVPEEGTDELSVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHH GRHLADMQTELQKTLRQQKNLVDLGLAVSKINHDMRNILSSAQLMSDRLVDAKDPMVRSF HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH APKLLRTIDRAVAYTGEVLAYGQATEGAPKRKIVPLSLLVRDVRDILALDPDSGIEFHDS HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC VPPDLTVDADSEQLFRVIHNLCRNAVQALQSDVANSAPRHLSISAQRAGSVVSIVIDDNG CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCEEEEEEECCC PGMPRKAKENLFSAFRGSARSGGTGLGLVIARELVLAHGGTIALVEKPGPGTQFRIEIAD CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECC RAASIQAARTA CHHHHHHHCCC >Mature Secondary Structure MFSKGVDSLDRTQDDPVHCMPGLTAGLSGRLLLLTVIFVMIAEVLIFVPSVANMRLSWLR CCCCCCCHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH DRLNTAAAAGAVIDGLQAELPRSVQNDTLMATGAKLIALRKDGTSRLLAVAETPPGVDEQ HHHHHHHHHHHHHHHHHHHCCCHHCCCEEEECCCEEEEEECCCCCEEEEEECCCCCCCCC YDLSDVSQAAAVRDAFSTLLFGGNRVIRVFDVVGDSDTIIELVLGENKLRAAMLAYARNV CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHH FLISIVLSLVTAGLIFISINRIMIRPIRRLTLGMQNFSEDPGNPERIFVPEEGTDELSVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHH GRHLADMQTELQKTLRQQKNLVDLGLAVSKINHDMRNILSSAQLMSDRLVDAKDPMVRSF HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH APKLLRTIDRAVAYTGEVLAYGQATEGAPKRKIVPLSLLVRDVRDILALDPDSGIEFHDS HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC VPPDLTVDADSEQLFRVIHNLCRNAVQALQSDVANSAPRHLSISAQRAGSVVSIVIDDNG CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCEEEEEEECCC PGMPRKAKENLFSAFRGSARSGGTGLGLVIARELVLAHGGTIALVEKPGPGTQFRIEIAD CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECC RAASIQAARTA CHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]